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Structure of the Dnmt1 Reader Module Complexed with a Unique Two-Mono-Ubiquitin Mark on Histone H3 Reveals the Basis for DNA Methylation Maintenance.
Ishiyama S, Nishiyama A, Saeki Y, Moritsugu K, Morimoto D, Yamaguchi L, Arai N, Matsumura R, Kawakami T, Mishima Y, Hojo H, Shimamura S, Ishikawa F, Tajima S, Tanaka K, Ariyoshi M, Shirakawa M, Ikeguchi M, Kidera A, Suetake I, Arita K, Nakanishi M. Ishiyama S, et al. Among authors: ikeguchi m. Mol Cell. 2017 Oct 19;68(2):350-360.e7. doi: 10.1016/j.molcel.2017.09.037. Mol Cell. 2017. PMID: 29053958 Free article.
Fission yeast Swi5-Sfr1 protein complex, an activator of Rad51 recombinase, forms an extremely elongated dogleg-shaped structure.
Kokabu Y, Murayama Y, Kuwabara N, Oroguchi T, Hashimoto H, Tsutsui Y, Nozaki N, Akashi S, Unzai S, Shimizu T, Iwasaki H, Sato M, Ikeguchi M. Kokabu Y, et al. Among authors: ikeguchi m. J Biol Chem. 2011 Dec 16;286(50):43569-76. doi: 10.1074/jbc.M111.303339. Epub 2011 Oct 27. J Biol Chem. 2011. PMID: 22033972 Free PMC article.
Linear response theory in dihedral angle space for protein structural change upon ligand binding.
Omori S, Fuchigami S, Ikeguchi M, Kidera A. Omori S, et al. Among authors: ikeguchi m. J Comput Chem. 2009 Dec;30(16):2602-8. doi: 10.1002/jcc.21269. J Comput Chem. 2009. PMID: 19373827
Coupling between proteins motion and ligand binding can be well explained by the linear response theory (Ikeguchi, M.; Ueno, J.; Sato, M.; Kidera, A. Phys Rev Lett 2005, 94, 078102.), in which the structural change is treated as a response to ligand binding. …
Coupling between proteins motion and ligand binding can be well explained by the linear response theory (Ikeguchi, M.; Ueno, J …
446 results