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Propionibacterium acnes: Disease-Causing Agent or Common Contaminant? Detection in Diverse Patient Samples by Next-Generation Sequencing.
Mollerup S, Friis-Nielsen J, Vinner L, Hansen TA, Richter SR, Fridholm H, Herrera JA, Lund O, Brunak S, Izarzugaza JM, Mourier T, Nielsen LP, Hansen AJ. Mollerup S, et al. Among authors: izarzugaza jm. J Clin Microbiol. 2016 Apr;54(4):980-7. doi: 10.1128/JCM.02723-15. Epub 2016 Jan 27. J Clin Microbiol. 2016. PMID: 26818667 Free PMC article.
Identification of Known and Novel Recurrent Viral Sequences in Data from Multiple Patients and Multiple Cancers.
Friis-Nielsen J, Kjartansdóttir KR, Mollerup S, Asplund M, Mourier T, Jensen RH, Hansen TA, Rey-Iglesia A, Richter SR, Nielsen IB, Alquezar-Planas DE, Olsen PV, Vinner L, Fridholm H, Nielsen LP, Willerslev E, Sicheritz-Pontén T, Lund O, Hansen AJ, Izarzugaza JM, Brunak S. Friis-Nielsen J, et al. Among authors: izarzugaza jm. Viruses. 2016 Feb 19;8(2):53. doi: 10.3390/v8020053. Viruses. 2016. PMID: 26907326 Free PMC article.
High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach.
Mollerup S, Asplund M, Friis-Nielsen J, Kjartansdóttir KR, Fridholm H, Hansen TA, Herrera JAR, Barnes CJ, Jensen RH, Richter SR, Nielsen IB, Pietroni C, Alquezar-Planas DE, Rey-Iglesia A, Olsen PVS, Rajpert-De Meyts E, Groth-Pedersen L, von Buchwald C, Jensen DH, Gniadecki R, Høgdall E, Langhoff JL, Pete I, Vereczkey I, Baranyai Z, Dybkaer K, Johnsen HE, Steiniche T, Hokland P, Rosenberg J, Baandrup U, Sicheritz-Pontén T, Willerslev E, Brunak S, Lund O, Mourier T, Vinner L, Izarzugaza JMG, Nielsen LP, Hansen AJ. Mollerup S, et al. J Infect Dis. 2019 Sep 13;220(8):1312-1324. doi: 10.1093/infdis/jiz318. J Infect Dis. 2019. PMID: 31253993 Free PMC article.
Contaminating viral sequences in high-throughput sequencing viromics: a linkage study of 700 sequencing libraries.
Asplund M, Kjartansdóttir KR, Mollerup S, Vinner L, Fridholm H, Herrera JAR, Friis-Nielsen J, Hansen TA, Jensen RH, Nielsen IB, Richter SR, Rey-Iglesia A, Matey-Hernandez ML, Alquezar-Planas DE, Olsen PVS, Sicheritz-Pontén T, Willerslev E, Lund O, Brunak S, Mourier T, Nielsen LP, Izarzugaza JMG, Hansen AJ. Asplund M, et al. Clin Microbiol Infect. 2019 Oct;25(10):1277-1285. doi: 10.1016/j.cmi.2019.04.028. Epub 2019 May 4. Clin Microbiol Infect. 2019. PMID: 31059795 Free article.
Traces of ATCV-1 associated with laboratory component contamination.
Kjartansdóttir KR, Friis-Nielsen J, Asplund M, Mollerup S, Mourier T, Jensen RH, Hansen TA, Rey-Iglesia A, Richter SR, Alquezar-Planas DE, Olsen PV, Vinner L, Fridholm H, Sicheritz-Pontén T, Nielsen LP, Brunak S, Willerslev E, Izarzugaza JM, Hansen AJ. Kjartansdóttir KR, et al. Among authors: izarzugaza jm. Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):E925-6. doi: 10.1073/pnas.1423756112. Epub 2015 Feb 5. Proc Natl Acad Sci U S A. 2015. PMID: 25654983 Free PMC article. No abstract available.
Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing.
Vinner L, Mourier T, Friis-Nielsen J, Gniadecki R, Dybkaer K, Rosenberg J, Langhoff JL, Cruz DF, Fonager J, Izarzugaza JM, Gupta R, Sicheritz-Ponten T, Brunak S, Willerslev E, Nielsen LP, Hansen AJ. Vinner L, et al. Among authors: izarzugaza jm. Sci Rep. 2015 Aug 19;5:13201. doi: 10.1038/srep13201. Sci Rep. 2015. PMID: 26285800 Free PMC article.
Analysis of a gene panel for targeted sequencing of colorectal cancer samples.
Jensen KH, Izarzugaza JMG, Juncker AS, Hansen RB, Hansen TF, Timshel P, Blondal T, Jensen TS, Rygaard-Hjalsted E, Mouritzen P, Thorsen M, Wernersson R, Nielsen HB, Jakobsen A, Brunak S, Sørensen FB. Jensen KH, et al. Oncotarget. 2018 Jan 10;9(10):9043-9060. doi: 10.18632/oncotarget.24138. eCollection 2018 Feb 6. Oncotarget. 2018. PMID: 29507673 Free PMC article.
92 results