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jagielak d
(84 results)?
Determining crystal structures through crowdsourcing and coursework.
Nat Commun. 2016 Sep 16;7:12549. doi: 10.1038/ncomms12549.
Nat Commun. 2016.
PMID: 27633552
Free PMC article.
A Maximum-Likelihood Approach to Force-Field Calibration.
Zaborowski B, Jagieła D, Czaplewski C, Hałabis A, Lewandowska A, Żmudzińska W, Ołdziej S, Karczyńska A, Omieczynski C, Wirecki T, Liwo A.
Zaborowski B, et al. Among authors: jagiela d.
J Chem Inf Model. 2015 Sep 28;55(9):2050-70. doi: 10.1021/acs.jcim.5b00395. Epub 2015 Aug 20.
J Chem Inf Model. 2015.
PMID: 26263302
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Corrigendum: Determining crystal structures through crowdsourcing and coursework.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, Flatten J, Rogawski DS, Koropatkin NM, Hailu TT, Jain N, Koldewey P, Ahlstrom LS, Chapman MR, Sikkema AP, Skiba MA, Maloney FP, Beinlich FR; Foldit Players; University of Michigan students; Popović Z, Baker D, Khatib F, Bardwell JC.
Horowitz S, et al.
Nat Commun. 2016 Oct 25;7:13392. doi: 10.1038/ncomms13392.
Nat Commun. 2016.
PMID: 27779204
Free PMC article.
No abstract available.
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Lessons from application of the UNRES force field to predictions of structures of CASP10 targets.
He Y, Mozolewska MA, Krupa P, Sieradzan AK, Wirecki TK, Liwo A, Kachlishvili K, Rackovsky S, Jagiela D, Ślusarz R, Czaplewski CR, Ołdziej S, Scheraga HA.
He Y, et al. Among authors: jagiela d.
Proc Natl Acad Sci U S A. 2013 Sep 10;110(37):14936-41. doi: 10.1073/pnas.1313316110. Epub 2013 Aug 26.
Proc Natl Acad Sci U S A. 2013.
PMID: 23980156
Free PMC article.
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Performance of protein-structure predictions with the physics-based UNRES force field in CASP11.
Krupa P, Mozolewska MA, Wiśniewska M, Yin Y, He Y, Sieradzan AK, Ganzynkowicz R, Lipska AG, Karczyńska A, Ślusarz M, Ślusarz R, Giełdoń A, Czaplewski C, Jagieła D, Zaborowski B, Scheraga HA, Liwo A.
Krupa P, et al. Among authors: jagiela d.
Bioinformatics. 2016 Nov 1;32(21):3270-3278. doi: 10.1093/bioinformatics/btw404. Epub 2016 Jul 4.
Bioinformatics. 2016.
PMID: 27378298
Free PMC article.
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A unified coarse-grained model of biological macromolecules based on mean-field multipole-multipole interactions.
Liwo A, Baranowski M, Czaplewski C, Gołaś E, He Y, Jagieła D, Krupa P, Maciejczyk M, Makowski M, Mozolewska MA, Niadzvedtski A, Ołdziej S, Scheraga HA, Sieradzan AK, Slusarz R, Wirecki T, Yin Y, Zaborowski B.
Liwo A, et al. Among authors: jagiela d.
J Mol Model. 2014 Aug;20(8):2306. doi: 10.1007/s00894-014-2306-5. Epub 2014 Jul 15.
J Mol Model. 2014.
PMID: 25024008
Free PMC article.
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Ensemble fits of restrained peptides' conformational equilibria to NMR data. Dependence on force fields: AMBER/8 ff03 versus ECEPP/3.
Ciarkowski J, Łuczak S, Jagieła D, Sikorska E, Wójcik J, Oleszczuk M, Izdebski J.
Ciarkowski J, et al. Among authors: jagiela d.
J Mol Graph Model. 2012 Feb;32:67-74. doi: 10.1016/j.jmgm.2011.10.004. Epub 2011 Oct 20.
J Mol Graph Model. 2012.
PMID: 22079210
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