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Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases.
Tørresen OK, Star B, Mier P, Andrade-Navarro MA, Bateman A, Jarnot P, Gruca A, Grynberg M, Kajava AV, Promponas VJ, Anisimova M, Jakobsen KS, Linke D. Tørresen OK, et al. Among authors: jakobsen ks. Nucleic Acids Res. 2019 Dec 2;47(21):10994-11006. doi: 10.1093/nar/gkz841. Nucleic Acids Res. 2019. PMID: 31584084 Free PMC article. Review.
The genome sequence of Atlantic cod reveals a unique immune system.
Star B, Nederbragt AJ, Jentoft S, Grimholt U, Malmstrøm M, Gregers TF, Rounge TB, Paulsen J, Solbakken MH, Sharma A, Wetten OF, Lanzén A, Winer R, Knight J, Vogel JH, Aken B, Andersen O, Lagesen K, Tooming-Klunderud A, Edvardsen RB, Tina KG, Espelund M, Nepal C, Previti C, Karlsen BO, Moum T, Skage M, Berg PR, Gjøen T, Kuhl H, Thorsen J, Malde K, Reinhardt R, Du L, Johansen SD, Searle S, Lien S, Nilsen F, Jonassen I, Omholt SW, Stenseth NC, Jakobsen KS. Star B, et al. Among authors: jakobsen ks. Nature. 2011 Aug 10;477(7363):207-10. doi: 10.1038/nature10342. Nature. 2011. PMID: 21832995 Free PMC article.
Genomic characterization of the Atlantic cod sex-locus.
Star B, Tørresen OK, Nederbragt AJ, Jakobsen KS, Pampoulie C, Jentoft S. Star B, et al. Among authors: jakobsen ks. Sci Rep. 2016 Aug 8;6:31235. doi: 10.1038/srep31235. Sci Rep. 2016. PMID: 27499266 Free PMC article.
Evolution of the immune system influences speciation rates in teleost fishes.
Malmstrøm M, Matschiner M, Tørresen OK, Star B, Snipen LG, Hansen TF, Baalsrud HT, Nederbragt AJ, Hanel R, Salzburger W, Stenseth NC, Jakobsen KS, Jentoft S. Malmstrøm M, et al. Among authors: jakobsen ks. Nat Genet. 2016 Oct;48(10):1204-10. doi: 10.1038/ng.3645. Epub 2016 Aug 22. Nat Genet. 2016. PMID: 27548311
192 results