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. 2024 Apr 24;11(4):231074.
doi: 10.1098/rsos.231074. eCollection 2024 Apr.

Active viscoelastic models for cell and tissue mechanics

Affiliations

Active viscoelastic models for cell and tissue mechanics

Bahareh Tajvidi Safa et al. R Soc Open Sci. .

Abstract

Living cells are out of equilibrium active materials. Cell-generated forces are transmitted across the cytoskeleton network and to the extracellular environment. These active force interactions shape cellular mechanical behaviour, trigger mechano-sensing, regulate cell adaptation to the microenvironment and can affect disease outcomes. In recent years, the mechanobiology community has witnessed the emergence of many experimental and theoretical approaches to study cells as mechanically active materials. In this review, we highlight recent advancements in incorporating active characteristics of cellular behaviour at different length scales into classic viscoelastic models by either adding an active tension-generating element or adjusting the resting length of an elastic element in the model. Summarizing the two groups of approaches, we will review the formulation and application of these models to understand cellular adaptation mechanisms in response to various types of mechanical stimuli, such as the effect of extracellular matrix properties and external loadings or deformations.

Keywords: active model; cell mechanics; cell modeling; tissue mechanics; viscoelasticity.

Conflict of interest statement

We declare we have no competing interests.

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. 2022 Dec 6;119(49):e2201600119.
doi: 10.1073/pnas.2201600119. Epub 2022 Dec 1.

Tension at intercellular junctions is necessary for accurate orientation of cell division in the epithelium plane

Affiliations

Tension at intercellular junctions is necessary for accurate orientation of cell division in the epithelium plane

Ana Lisica et al. Proc Natl Acad Sci U S A. .

Abstract

The direction in which a cell divides is set by the orientation of its mitotic spindle and is important for determining cell fate, controlling tissue shape, and maintaining tissue architecture. Divisions parallel to the epithelial plane sustain tissue expansion. By contrast, divisions perpendicular to the plane promote tissue stratification and lead to the loss of epithelial cells from the tissue-an event that has been suggested to promote metastasis. Much is known about the molecular machinery involved in orienting the spindle, but less is known about the contribution of mechanical factors, such as tissue tension, in ensuring spindle orientation in the plane of the epithelium. This is important as epithelia are continuously subjected to mechanical stresses. To explore this further, we subjected suspended epithelial monolayers devoid of extracellular matrix to varying levels of tissue tension to study the orientation of cell divisions relative to the tissue plane. This analysis revealed that lowering tissue tension by compressing epithelial monolayers or by inhibiting myosin contractility increased the frequency of out-of-plane divisions. Reciprocally, increasing tissue tension by elevating cell contractility or by tissue stretching restored accurate in-plane cell divisions. Moreover, a characterization of the geometry of cells within these epithelia suggested that spindles can sense tissue tension through its impact on tension at subcellular surfaces, independently of their shape. Overall, these data suggest that accurate spindle orientation in the plane of the epithelium relies on a threshold level of tension at intercellular junctions.

Keywords: epithelium; out-of-plane division; spindle orientation; tissue tension.

Conflict of interest statement

The authors declare no competing interest.

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Editorial
. 2022 Nov 9;45(11):90.
doi: 10.1140/epje/s10189-022-00240-z.

Tissue mechanics

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Editorial

Tissue mechanics

Alexandre Kabla et al. Eur Phys J E Soft Matter. .
No abstract available

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. 2022 Jun 28;4(6):2689-2698.
doi: 10.1021/acsaelm.2c00217. Epub 2022 Jun 2.

Indium Tin Oxide-Free Inverted Organic Photovoltaics Using Laser-Induced Forward Transfer Silver Nanoparticle Embedded Metal Grids

Affiliations

Indium Tin Oxide-Free Inverted Organic Photovoltaics Using Laser-Induced Forward Transfer Silver Nanoparticle Embedded Metal Grids

Sergey M Pozov et al. ACS Appl Electron Mater. .

Abstract

Laser-induced forward transfer (LIFT) printing has emerged as a valid digital printing technique capable of transferring and printing a wide range of electronic materials. In this paper, we present for the first time LIFT printing as a method to fabricate silver (Ag) nanoparticle (np) grids for the development of indium tin oxide (ITO)-free inverted PM6:Y6 nonfullerene acceptor organic photovoltaics (OPVs). Limitations of the direct use of LIFT-printed Ag np grids in inverted ITO-free OPVs are addressed through a Ag grid embedding process. The embedded laser-printed Ag grid lines have high electrical conductivity, while the Ag metal grid transparency is varied by altering the number of Ag grid lines within the inverted OPVs' ITO-free bottom electrode. Following the presented Ag-grid embedding (EMP) process, metal-grid design optimizations, and device engineering methods incorporating an EMB-nine-line Ag np grid/PH500/AI4083/ZnO bottom electrode, we have demonstrated inverted ITO-free OPVs incorporating laser-printed Ag grids with 11.0% power conversion efficiency.

Conflict of interest statement

The authors declare no competing financial interest.

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Review
. 2022 Apr 29;22(9):3400.
doi: 10.3390/s22093400.

A Systematic Literature Review on Machine and Deep Learning Approaches for Detecting Attacks in RPL-Based 6LoWPAN of Internet of Things

Affiliations
Review

A Systematic Literature Review on Machine and Deep Learning Approaches for Detecting Attacks in RPL-Based 6LoWPAN of Internet of Things

Taief Alaa Al-Amiedy et al. Sensors (Basel). .

Abstract

The IETF Routing Over Low power and Lossy network (ROLL) working group defined IPv6 Routing Protocol for Low Power and Lossy Network (RPL) to facilitate efficient routing in IPv6 over Low-Power Wireless Personal Area Networks (6LoWPAN). Limited resources of 6LoWPAN nodes make it challenging to secure the environment, leaving it vulnerable to threats and security attacks. Machine Learning (ML) and Deep Learning (DL) approaches have shown promise as effective and efficient mechanisms for detecting anomalous behaviors in RPL-based 6LoWPAN. Therefore, this paper systematically reviews and critically analyzes the research landscape on ML, DL, and combined ML-DL approaches applied to detect attacks in RPL networks. In addition, this study examined existing datasets designed explicitly for the RPL network. This work collects relevant studies from five major databases: Google Scholar, Springer Link, Scopus, Science Direct, and IEEE Xplore® digital library. Furthermore, 15,543 studies, retrieved from January 2016 to mid-2021, were refined according to the assigned inclusion criteria and designed research questions resulting in 49 studies. Finally, a conclusive discussion highlights the issues and challenges in the existing studies and proposes several future research directions.

Keywords: 6LoWPAN; Deep Learning (DL); IPv6; Internet of Thing (IoT); Low Power and Lossy Network (LLN); Machine Learning (ML); RPL security and threats; Systematic Literature Review (SLR).

Conflict of interest statement

The authors declare no conflict of interest.

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Review
. 2022 Jun;32(6):537-551.
doi: 10.1016/j.tcb.2022.01.005. Epub 2022 Feb 18.

Fracture in living tissues

Affiliations
Review

Fracture in living tissues

Alessandra Bonfanti et al. Trends Cell Biol. 2022 Jun.

Abstract

During development and in adult physiology, living tissues are continuously subjected to mechanical stresses originating either from cellular processes intrinsic to the tissue or from external forces. As a consequence, rupture is a constant risk and can arise as a result of excessive stresses or because of tissue weakening through genetic abnormalities or pathologies. Tissue fracture is a multiscale process involving the unzipping of intercellular adhesions at the molecular scale in response to stresses arising at the tissue or cellular scale that are transmitted to adhesion complexes via the cytoskeleton. In this review we detail experimental characterization and theoretical approaches for understanding the fracture of living tissues at the tissue, cellular, and molecular scales.

Keywords: cadherin; cytoskeleton; desmosome; fracture.

Conflict of interest statement

Declaration of interests The author declare no conflicts of interest.

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. 2022 Jan 1;93(1):014104.
doi: 10.1063/5.0076901.

autohaem: 3D printed devices for automated preparation of blood smears

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autohaem: 3D printed devices for automated preparation of blood smears

Samuel McDermott et al. Rev Sci Instrum. .

Abstract

The process of making blood smears is common in both research and clinical settings for investigating the health of blood cells and the presence of blood-borne parasites. It is very often carried out manually. We focus here on smears for malaria diagnosis and research, which are frequently analyzed by optical microscopy and require a high quality. Automating the smear preparation promises to increase throughput and to improve the quality and consistency of the smears. We present here two devices (manual and motorized) designed to aid in the making of blood smears. These are fully documented, open-source hardware, and an important principle was to make them easily fabricated locally anywhere. Designs and assembly instructions are freely available under an open license. We also describe an image analysis pipeline for characterizing the quality of smears and use it to optimize the settings and tunable parameters in the two devices. The devices perform as well as expert human operators while not requiring a trained operator and offering potential advantages in reproducibility and standardization across facilities.

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. 2021 Sep 29;11(1):19357.
doi: 10.1038/s41598-021-98233-z.

Strain maps characterize the symmetry of convergence and extension patterns during zebrafish gastrulation

Affiliations

Strain maps characterize the symmetry of convergence and extension patterns during zebrafish gastrulation

Dipanjan Bhattacharya et al. Sci Rep. .

Abstract

During gastrulation of the zebrafish embryo, the cap of blastoderm cells organizes into the axial body plan of the embryo with left-right symmetry and head-tail, dorsal-ventral polarities. Our labs have been interested in the mechanics of early development and have investigated whether these large-scale cell movements can be described as tissue-level mechanical strain by a tectonics-based approach. The first step is to image the positions of all nuclei from mid-epiboly to early segmentation by digital sheet light microscopy, organize the surface of the embryo into multi-cell spherical domains, construct velocity fields from the movements of these domains and extract strain rate maps from the change in density of the domains. During gastrulation, tensile/expansive and compressive strains in the axial and equatorial directions are detected as anterior and posterior expansion along the anterior-posterior axis and medial-lateral compression across the dorsal-ventral axis and corresponds to the well characterized morphological movements of convergence and extension. Following gastrulation strain is represented by localized medial expansion at the onset of segmentation and anterior expansion at the onset of neurulation. In addition to linear strain, symmetric patterns of rotation/curl are first detected in the animal hemispheres at mid-epiboly and then the vegetal hemispheres by the end of gastrulation. In embryos treated with C59, a Wnt inhibitor that inhibits head and tail extension, the axial extension and vegetal curl are absent. By analysing the temporal sequence of large-scale movements, deformations across the embryo can be attributed to a combination of epiboly and dorsal convergence-extension.

Conflict of interest statement

The authors declare no competing interests.

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. 2020 Jul;102(1-1):012401.
doi: 10.1103/PhysRevE.102.012401.

Tug-of-war between stretching and bending in living cell sheets

Affiliations

Tug-of-war between stretching and bending in living cell sheets

P Recho et al. Phys Rev E. 2020 Jul.

Abstract

The balance between stretching and bending deformations characterizes shape transitions of thin elastic sheets. While stretching dominates the mechanical response in tension, bending dominates in compression after an abrupt buckling transition. Recently, experimental results in suspended living epithelial monolayers have shown that, due to the asymmetry in surface stresses generated by molecular motors across the thickness e of the epithelium, the free edges of such tissues spontaneously curl out-of-plane, stretching the sheet in-plane as a result. This suggests that a competition between bending and stretching sets the morphology of the tissue margin. In this paper, we use the framework of non-Euclidean plates to incorporate active pre-strain and spontaneous curvature to the theory of thin elastic shells. We show that, when the spontaneous curvature of the sheet scales like 1/e, stretching and bending energies have the same scaling in the limit of a vanishingly small thickness and therefore both compete, in a way that is continuously altered by an external tension, to define the three-dimensional shape of the tissue.

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. 2020 Jul 3;2(1):vdaa081.
doi: 10.1093/noajnl/vdaa081. eCollection 2020 Jan-Dec.

Spatial heterogeneity of cell-matrix adhesive forces predicts human glioblastoma migration

Affiliations

Spatial heterogeneity of cell-matrix adhesive forces predicts human glioblastoma migration

Rasha Rezk et al. Neurooncol Adv. .

Abstract

Background: Glioblastoma (GBM) is a highly aggressive incurable brain tumor. The main cause of mortality in GBM patients is the invasive rim of cells migrating away from the main tumor mass and invading healthy parts of the brain. Although the motion is driven by forces, our current understanding of the physical factors involved in glioma infiltration remains limited. This study aims to investigate the adhesion properties within and between patients' tumors on a cellular level and test whether these properties correlate with cell migration.

Methods: Six tissue samples were taken from spatially separated sections during 5-aminolevulinic acid (5-ALA) fluorescence-guided surgery. Navigated biopsy samples were collected from strongly fluorescent tumor cores, a weak fluorescent tumor rim, and nonfluorescent tumor margins. A microfluidics device was built to induce controlled shear forces to detach cells from monolayer cultures. Cells were cultured on low modulus polydimethylsiloxane representative of the stiffness of brain tissue. Cell migration and morphology were then obtained using time-lapse microscopy.

Results: GBM cell populations from different tumor fractions of the same patient exhibited different migratory and adhesive behaviors. These differences were associated with sampling location and amount of 5-ALA fluorescence. Cells derived from weak- and nonfluorescent tumor tissue were smaller, adhered less well, and migrated quicker than cells derived from strongly fluorescent tumor mass.

Conclusions: GBM tumors are biomechanically heterogeneous. Selecting multiple populations and broad location sampling are therefore important to consider for drug testing.

Keywords: cell migration; cell-matrix adhesion; glioblastoma.

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. 2020 Jul;16(7):802-809.
doi: 10.1038/s41567-020-0875-z. Epub 2020 May 4.

The role of single cell mechanical behavior and polarity in driving collective cell migration

Affiliations

The role of single cell mechanical behavior and polarity in driving collective cell migration

Shreyansh Jain et al. Nat Phys. 2020 Jul.

Abstract

The directed migration of cell collectives is essential in various physiological processes, such as epiboly, intestinal epithelial turnover, and convergent extension during morphogenesis as well as during pathological events like wound healing and cancer metastasis. Collective cell migration leads to the emergence of coordinated movements over multiple cells. Our current understanding emphasizes that these movements are mainly driven by large-scale transmission of signals through adherens junctions. In this study, we show that collective movements of epithelial cells can be triggered by polarity signals at the single cell level through the establishment of coordinated lamellipodial protrusions. We designed a minimalistic model system to generate one-dimensional epithelial trains confined in ring shaped patterns that recapitulate rotational movements observed in vitro in cellular monolayers and in vivo in genitalia or follicular cell rotation. Using our system, we demonstrated that cells follow coordinated rotational movements after the establishment of directed Rac1-dependent polarity over the entire monolayer. Our experimental and numerical approaches show that the maintenance of coordinated migration requires the acquisition of a front-back polarity within each single cell but does not require the maintenance of cell-cell junctions. Taken together, these unexpected findings demonstrate that collective cell dynamics in closed environments as observed in multiple in vitro and in vivo situations can arise from single cell behavior through a sustained memory of cell polarity.

Conflict of interest statement

Competing interests: Authors declare no competing interests.

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Review
. 2020 Jul 8;16(26):6002-6020.
doi: 10.1039/d0sm00354a.

Fractional viscoelastic models for power-law materials

Affiliations
Review

Fractional viscoelastic models for power-law materials

A Bonfanti et al. Soft Matter. .

Abstract

Soft materials often exhibit a distinctive power-law viscoelastic response arising from broad distribution of time-scales present in their complex internal structure. A promising tool to accurately describe the rheological behaviour of soft materials is fractional calculus. However, its use in the scientific community remains limited due to the unusual notation and non-trivial properties of fractional operators. This review aims to provide a clear and accessible description of fractional viscoelastic models for a broad audience and to demonstrate the ability of these models to deliver a unified approach for the characterisation of power-law materials. The use of a consistent framework for the analysis of rheological data would help classify the empirical behaviours of soft and biological materials, and better understand their response.

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. 2020 Apr 28;117(17):9377-9383.
doi: 10.1073/pnas.1917838117. Epub 2020 Apr 13.

Curling of epithelial monolayers reveals coupling between active bending and tissue tension

Affiliations

Curling of epithelial monolayers reveals coupling between active bending and tissue tension

Jonathan Fouchard et al. Proc Natl Acad Sci U S A. .

Abstract

Epithelial monolayers are two-dimensional cell sheets which compartmentalize the body and organs of multicellular organisms. Their morphogenesis during development or pathology results from patterned endogenous and exogenous forces and their interplay with tissue mechanical properties. In particular, bending of epithelia is thought to result from active torques generated by the polarization of myosin motors along their apicobasal axis. However, the contribution of these out-of-plane forces to morphogenesis remains challenging to evaluate because of the lack of direct mechanical measurement. Here we use epithelial curling to characterize the out-of-plane mechanics of epithelial monolayers. We find that curls of high curvature form spontaneously at the free edge of epithelial monolayers devoid of substrate in vivo and in vitro. Curling originates from an enrichment of myosin in the basal domain that generates an active spontaneous curvature. By measuring the force necessary to flatten curls, we can then estimate the active torques and the bending modulus of the tissue. Finally, we show that the extent of curling is controlled by the interplay between in-plane and out-of-plane stresses in the monolayer. Such mechanical coupling emphasizes a possible role for in-plane stresses in shaping epithelia during morphogenesis.

Keywords: Myosin II contractility; active torques; curling; epithelial morphogenesis; tissue mechanics.

Conflict of interest statement

The authors declare no competing interest.

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. 2020 Jan 22;7(1):190920.
doi: 10.1098/rsos.190920. eCollection 2020 Jan.

A unified rheological model for cells and cellularised materials

Affiliations

A unified rheological model for cells and cellularised materials

A Bonfanti et al. R Soc Open Sci. .

Abstract

The mechanical response of single cells and tissues exhibits a broad distribution of time-scales that often gives rise to a distinctive power-law rheology. Such complex behaviour cannot be easily captured by traditional rheological approaches, making material characterisation and predictive modelling very challenging. Here, we present a novel model combining conventional viscoelastic elements with fractional calculus that successfully captures the macroscopic relaxation response of epithelial monolayers. The parameters extracted from the fitting of the relaxation modulus allow prediction of the response of the same material to slow stretch and creep, indicating that the model captured intrinsic material properties. Two characteristic times, derived from the model parameters, delimit different regimes in the materials response. We compared the response of tissues with the behaviour of single cells as well as intra and extra-cellular components, and linked the power-law behaviour of the epithelium to the dynamics of the cell cortex. Such a unified model for the mechanical response of biological materials provides a novel and robust mathematical approach to consistently analyse experimental data and uncover similarities and differences in reported behaviour across experimental methods and research groups. It also sets the foundations for more accurate computational models of tissue mechanics.

Keywords: cell rheology; fractional viscoelasticity; tissue rheology.

Conflict of interest statement

We declare we have no competing interest.

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. 2020 Feb 4;117(5):2506-2512.
doi: 10.1073/pnas.1905730117. Epub 2020 Jan 21.

Pressure sensing through Piezo channels controls whether cells migrate with blebs or pseudopods

Affiliations

Pressure sensing through Piezo channels controls whether cells migrate with blebs or pseudopods

Nishit Srivastava et al. Proc Natl Acad Sci U S A. .

Abstract

Blebs and pseudopods can both power cell migration, with blebs often favored in tissues, where cells encounter increased mechanical resistance. To investigate how migrating cells detect and respond to mechanical forces, we used a "cell squasher" to apply uniaxial pressure to Dictyostelium cells chemotaxing under soft agarose. As little as 100 Pa causes a rapid (<10 s), sustained shift to movement with blebs rather than pseudopods. Cells are flattened under load and lose volume; the actin cytoskeleton is reorganized, with myosin II recruited to the cortex, which may pressurize the cytoplasm for blebbing. The transition to bleb-driven motility requires extracellular calcium and is accompanied by increased cytosolic calcium. It is largely abrogated in cells lacking the Piezo stretch-operated channel; under load, these cells persist in using pseudopods and chemotax poorly. We propose that migrating cells sense pressure through Piezo, which mediates calcium influx, directing movement with blebs instead of pseudopods.

Keywords: Dictyostelium; Piezo; blebbing; cell migration; chemotaxis.

Conflict of interest statement

The authors declare no competing interest.

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. 2020 Jan;19(1):109-117.
doi: 10.1038/s41563-019-0461-x. Epub 2019 Aug 26.

Actomyosin controls planarity and folding of epithelia in response to compression

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Actomyosin controls planarity and folding of epithelia in response to compression

Tom P J Wyatt et al. Nat Mater. 2020 Jan.

Abstract

Throughout embryonic development and adult life, epithelia are subjected to compressive deformations. While these have been shown to trigger mechanosensitive responses such as cell extrusion and differentiation, which span tens of minutes, little is known about how epithelia adapt to compression over shorter timescales. Here, using suspended epithelia, we uncover the immediate response of epithelial tissues to the application of in-plane compressive strains (5-80%). We show that fast compression induces tissue buckling followed by actomyosin-dependent tissue flattening that erases the buckle within tens of seconds, in both mono- and multi-layered epithelia. Strikingly, we identify a well-defined limit to this response, so that stable folds form in the tissue when compressive strains exceed a 'buckling threshold' of ~35%. A combination of experiment and modelling shows that this behaviour is orchestrated by adaptation of the actomyosin cytoskeleton as it re-establishes tissue tension following compression. Thus, tissue pre-tension allows epithelia to both buffer against deformation and sets their ability to form and retain folds during morphogenesis.

Comment in

  • To buckle or not to buckle.
    Schwarz US. Schwarz US. Nat Mater. 2020 Jan;19(1):8-9. doi: 10.1038/s41563-019-0543-9. Nat Mater. 2020. PMID: 31853032 No abstract available.

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. 2019 Aug;15(8):839-847.
doi: 10.1038/s41567-019-0516-6. Epub 2019 May 13.

Stress relaxation in epithelial monolayers is controlled by the actomyosin cortex

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Stress relaxation in epithelial monolayers is controlled by the actomyosin cortex

Nargess Khalilgharibi et al. Nat Phys. 2019 Aug.

Abstract

Epithelial monolayers are one-cell thick tissue sheets that line most of the body surfaces, separating internal and external environments. As part of their function, they must withstand extrinsic mechanical stresses applied at high strain rates. However, little is known about how monolayers respond to mechanical deformations. Here, by subjecting suspended epithelial monolayers to stretch, we find that they dissipate stresses on a minute timescale and that relaxation can be described by a power law with an exponential cut-off at timescales larger than ~10 s. This process involves an increase in monolayer length, pointing to active remodelling of cellular biopolymers at the molecular scale during relaxation. Strikingly, monolayers consisting of tens of thousands of cells relax stress with similar dynamics to single rounded cells and both respond similarly to perturbations of the actomyosin cytoskeleton. By contrast, cell-cell junctional complexes and intermediate filaments do not relax tissue stress, but form stable connections between cells, allowing monolayers to behave rheologically as single cells. Taken together our data show that actomyosin dynamics governs the rheological properties of epithelial monolayers, dissipating applied stresses, and enabling changes in monolayer length.

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. 2018 Oct 31;11(11):2142.
doi: 10.3390/ma11112142.

Selective Laser Sintering of Laser Printed Ag Nanoparticle Micropatterns at High Repetition Rates

Affiliations

Selective Laser Sintering of Laser Printed Ag Nanoparticle Micropatterns at High Repetition Rates

Filimon Zacharatos et al. Materials (Basel). .

Abstract

The increasing development of flexible and printed electronics has fueled substantial advancements in selective laser sintering, which has been attracting interest over the past decade. Laser sintering of metal nanoparticle dispersions in particular (from low viscous inks to high viscous pastes) offers significant advantages with respect to more conventional thermal sintering or curing techniques. Apart from the obvious lateral selectivity, the use of short-pulsed and high repetition rate lasers minimizes the heat affected zone and offers unparalleled control over a digital process, enabling the processing of stacked and pre-structured layers on very sensitive polymeric substrates. In this work, the authors have conducted a systematic investigation of the laser sintering of micro-patterns comprising Ag nanoparticle high viscous inks: The effect of laser pulse width within the range of 20⁻200 nanoseconds (ns), a regime which many commercially available, high repetition rate lasers operate in, has been thoroughly investigated experimentally in order to define the optimal processing parameters for the fabrication of highly conductive Ag patterns on polymeric substrates. The in-depth temperature profiles resulting from the effect of laser pulses of varying pulse widths have been calculated using a numerical model relying on the finite element method, which has been fed with physical parameters extracted from optical and structural characterization. Electrical characterization of the resulting sintered micro-patterns has been benchmarked against the calculated temperature profiles, so that the resistivity can be associated with the maximal temperature value. This quantitative correlation offers the possibility to predict the optimal process window in future laser sintering experiments. The reported computational and experimental findings will foster the wider adoption of laser micro-sintering technology for laboratory and industrial use.

Keywords: heat affected zone; high speed laser processing; laser induced forward transfer; laser sintering; silver nanoparticle inks.

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The authors declare no conflict of interest.

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. 2017 Nov 20;43(4):480-492.e6.
doi: 10.1016/j.devcel.2017.09.018. Epub 2017 Oct 26.

Myosin II Controls Junction Fluctuations to Guide Epithelial Tissue Ordering

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Myosin II Controls Junction Fluctuations to Guide Epithelial Tissue Ordering

Scott Curran et al. Dev Cell. .

Abstract

Under conditions of homeostasis, dynamic changes in the length of individual adherens junctions (AJs) provide epithelia with the fluidity required to maintain tissue integrity in the face of intrinsic and extrinsic forces. While the contribution of AJ remodeling to developmental morphogenesis has been intensively studied, less is known about AJ dynamics in other circumstances. Here, we study AJ dynamics in an epithelium that undergoes a gradual increase in packing order, without concomitant large-scale changes in tissue size or shape. We find that neighbor exchange events are driven by stochastic fluctuations in junction length, regulated in part by junctional actomyosin. In this context, the developmental increase of isotropic junctional actomyosin reduces the rate of neighbor exchange, contributing to tissue order. We propose a model in which the local variance in tension between junctions determines whether actomyosin-based forces will inhibit or drive the topological transitions that either refine or deform a tissue.

Keywords: Drosophila; Myosin; cadherin; epithelia; junction fluctuations; morphogenesis; neighbor exchange; tissue mechanics; tissue refinement; vertex model.

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. 2017 Aug 23;4(8):161007.
doi: 10.1098/rsos.161007. eCollection 2017 Aug.

Tumour heterogeneity promotes collective invasion and cancer metastatic dissemination

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Tumour heterogeneity promotes collective invasion and cancer metastatic dissemination

Adrien Hallou et al. R Soc Open Sci. .

Abstract

Heterogeneity within tumour cell populations is commonly observed in most cancers. However, its impact on metastatic dissemination, one of the primary determinants of the disease prognosis, remains poorly understood. Working with a simplified numerical model of tumour spheroids, we investigated the impact of mechanical heterogeneity on the onset of tumour invasion into surrounding tissues. Our work establishes a positive link between tumour heterogeneity and metastatic dissemination, and recapitulates a number of invasion patterns identified in vivo, such as multicellular finger-like protrusions. Two complementary mechanisms are at play in heterogeneous tumours. A small proportion of stronger cells are able to initiate and lead the escape of cells, while collective effects in the bulk of the tumour provide the coordination required to sustain the invasive process through multicellular streaming. This suggests that the multicellular dynamics observed during metastasis is a generic feature of mechanically heterogeneous cell populations and might rely on a limited and generic set of attributes.

Keywords: cancer; collective invasion; metastasis; tumour heterogeneity.

Conflict of interest statement

We declare we have no competing interests.

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. 2017 Mar 15;28(6):809-816.
doi: 10.1091/mbc.E16-08-0575. Epub 2017 Jan 25.

Method to study cell migration under uniaxial compression

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Method to study cell migration under uniaxial compression

Nishit Srivastava et al. Mol Biol Cell. .

Abstract

The chemical, physical, and mechanical properties of the extracellular environment have a strong effect on cell migration. Aspects such as pore size or stiffness of the matrix influence the selection of the mechanism used by cells to propel themselves, including by pseudopods or blebbing. How a cell perceives its environment and how such a cue triggers a change in behavior are largely unknown, but mechanics is likely to be involved. Because mechanical conditions are often controlled by modifying the composition of the environment, separating chemical and physical contributions is difficult and requires multiple controls. Here we propose a simple method to impose a mechanical compression on individual cells without altering the composition of the matrix. Live imaging during compression provides accurate information about the cell's morphology and migratory phenotype. Using Dictyostelium as a model, we observe that a compression of the order of 500 Pa flattens the cells under gel by up to 50%. This uniaxial compression directly triggers a transition in the mode of migration from primarily pseudopodial to bleb driven in <30 s. This novel device is therefore capable of influencing cell migration in real time and offers a convenient approach with which to systematically study mechanotransduction in confined environments.

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Review
. 2016 Oct:42:113-120.
doi: 10.1016/j.ceb.2016.06.003. Epub 2016 Jun 29.

The dynamic mechanical properties of cellularised aggregates

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Review

The dynamic mechanical properties of cellularised aggregates

Nargess Khalilgharibi et al. Curr Opin Cell Biol. 2016 Oct.

Abstract

Cellularised materials are composed of cells interfaced through specialised intercellular junctions that link the cytoskeleton of one cell to that of its neighbours allowing for transmission of forces. Cellularised materials are common in early development and adult tissues where they can be found in the form of cell sheets, cysts, or amorphous aggregates and in pathophysiological conditions such as cancerous tumours. Given the growing realisation that forces can regulate cell physiology and developmental processes, understanding how cellularised materials deform under mechanical stress or dissipate stress appear as key biological questions. In this review, we will discuss the dynamic mechanical properties of cellularised materials devoid of extracellular matrix.

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. 2016 May 31;15(9):2076-88.
doi: 10.1016/j.celrep.2016.04.067. Epub 2016 May 19.

Leader Cells Define Directionality of Trunk, but Not Cranial, Neural Crest Cell Migration

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Leader Cells Define Directionality of Trunk, but Not Cranial, Neural Crest Cell Migration

Jo Richardson et al. Cell Rep. .

Abstract

Collective cell migration is fundamental for life and a hallmark of cancer. Neural crest (NC) cells migrate collectively, but the mechanisms governing this process remain controversial. Previous analyses in Xenopus indicate that cranial NC (CNC) cells are a homogeneous population relying on cell-cell interactions for directional migration, while chick embryo analyses suggest a heterogeneous population with leader cells instructing directionality. Our data in chick and zebrafish embryos show that CNC cells do not require leader cells for migration and all cells present similar migratory capacities. In contrast, laser ablation of trunk NC (TNC) cells shows that leader cells direct movement and cell-cell contacts are required for migration. Moreover, leader and follower identities are acquired before the initiation of migration and remain fixed thereafter. Thus, two distinct mechanisms establish the directionality of CNC cells and TNC cells. This implies the existence of multiple molecular mechanisms for collective cell migration.

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. 2016 May;13(118):20151077.
doi: 10.1098/rsif.2015.1077.

Emergent patterns from probabilistic generalizations of lateral activation and inhibition

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Emergent patterns from probabilistic generalizations of lateral activation and inhibition

Lisa Willis et al. J R Soc Interface. 2016 May.

Abstract

The combination of laterally activating and inhibiting feedbacks is well known to spontaneously generate spatial organization. It was introduced by Gierer and Meinhardt as an extension of Turing's great insight that two reacting and diffusing chemicals can spontaneously drive spatial morphogenesis per se In this study, we develop an accessible nonlinear and discrete probabilistic model to study simple generalizations of lateral activation and inhibition. By doing so, we identify a range of modes of morphogenesis beyond the familiar Turing-type modes; notably, beyond stripes, hexagonal nets, pores and labyrinths, we identify labyrinthine highways, Kagome lattices, gyrating labyrinths and multi-colour travelling waves and spirals. The results are discussed within the context of Turing's original motivating interest: the mechanisms which underpin the morphogenesis of living organisms.

Keywords: lateral inhibition; nonlinear stochastic model; pattern formation.

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. 2016 Feb;87(2):025104.
doi: 10.1063/1.4941068.

A one-piece 3D printed flexure translation stage for open-source microscopy

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Free article

A one-piece 3D printed flexure translation stage for open-source microscopy

James P Sharkey et al. Rev Sci Instrum. 2016 Feb.
Free article

Abstract

Open source hardware has the potential to revolutionise the way we build scientific instruments; with the advent of readily available 3D printers, mechanical designs can now be shared, improved, and replicated faster and more easily than ever before. However, printed parts are typically plastic and often perform poorly compared to traditionally machined mechanisms. We have overcome many of the limitations of 3D printed mechanisms by exploiting the compliance of the plastic to produce a monolithic 3D printed flexure translation stage, capable of sub-micron-scale motion over a range of 8 × 8 × 4 mm. This requires minimal post-print clean-up and can be automated with readily available stepper motors. The resulting plastic composite structure is very stiff and exhibits remarkably low drift, moving less than 20 μm over the course of a week, without temperature stabilisation. This enables us to construct a miniature microscope with excellent mechanical stability, perfect for time-lapse measurements in situ in an incubator or fume hood. The ease of manufacture lends itself to use in containment facilities where disposability is advantageous and to experiments requiring many microscopes in parallel. High performance mechanisms based on printed flexures need not be limited to microscopy, and we anticipate their use in other devices both within the laboratory and beyond.

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. 2015 Jul 9:6:7683.
doi: 10.1038/ncomms8683.

Gap geometry dictates epithelial closure efficiency

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Gap geometry dictates epithelial closure efficiency

Andrea Ravasio et al. Nat Commun. .

Abstract

Closure of wounds and gaps in tissues is fundamental for the correct development and physiology of multicellular organisms and, when misregulated, may lead to inflammation and tumorigenesis. To re-establish tissue integrity, epithelial cells exhibit coordinated motion into the void by active crawling on the substrate and by constricting a supracellular actomyosin cable. Coexistence of these two mechanisms strongly depends on the environment. However, the nature of their coupling remains elusive because of the complexity of the overall process. Here we demonstrate that epithelial gap geometry in both in vitro and in vivo regulates these collective mechanisms. In addition, the mechanical coupling between actomyosin cable contraction and cell crawling acts as a large-scale regulator to control the dynamics of gap closure. Finally, our computational modelling clarifies the respective roles of the two mechanisms during this process, providing a robust and universal mechanism to explain how epithelial tissues restore their integrity.

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. 2015 May;72(5):235-45.
doi: 10.1002/cm.21223.

Structured illumination microscopy reveals focal adhesions are composed of linear subunits

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Structured illumination microscopy reveals focal adhesions are composed of linear subunits

Shiqiong Hu et al. Cytoskeleton (Hoboken). 2015 May.

Abstract

The ability to mechanically interact with the extracellular matrix is a fundamental feature of adherent eukaryotic cells. Cell-matrix adhesion in many cell types is mediated by protein complexes called focal adhesions (FAs). Recent progress in super resolution microscopy revealed FAs possess an internal organization, yet such methods do not enable observation of the formation and dynamics of their internal structure in living cells. Here, we combine structured illumination microscopy (SIM) with total internal reflection fluorescence microscopy (TIRF) to show that the proteins inside FA patches are distributed along elongated subunits, typically 300 ± 100 nm wide, separated by 400 ± 100 nm, and individually connected to actin cables. We further show that the formation and dynamics of these linear subunits are intimately linked to radial actin fiber formation and actomyosin contractility. We found FA growth to be the result of nucleation of new linear subunits and their coordinated elongation. Taken together, this study reveals that the basic units of mature focal adhesion are 300-nm-wide elongated, dynamic structures. We anticipate this ultrastructure to be relevant to investigation of the function of FAs and their behavior in response to mechanical stress.

Keywords: cell mechanics; cytoskeleton; focal adhesion; mechanobiology; paxillin; structured illumination microscopy.

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. 2015 May 5;112(18):5726-31.
doi: 10.1073/pnas.1420585112. Epub 2015 Apr 23.

Emergence of homeostatic epithelial packing and stress dissipation through divisions oriented along the long cell axis

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Emergence of homeostatic epithelial packing and stress dissipation through divisions oriented along the long cell axis

Tom P J Wyatt et al. Proc Natl Acad Sci U S A. .

Abstract

Cell division plays an important role in animal tissue morphogenesis, which depends, critically, on the orientation of divisions. In isolated adherent cells, the orientation of mitotic spindles is sensitive to interphase cell shape and the direction of extrinsic mechanical forces. In epithelia, the relative importance of these two factors is challenging to assess. To do this, we used suspended monolayers devoid of ECM, where divisions become oriented following a stretch, allowing the regulation and function of epithelial division orientation in stress relaxation to be characterized. Using this system, we found that divisions align better with the long, interphase cell axis than with the monolayer stress axis. Nevertheless, because the application of stretch induces a global realignment of interphase long axes along the direction of extension, this is sufficient to bias the orientation of divisions in the direction of stretch. Each division redistributes the mother cell mass along the axis of division. Thus, the global bias in division orientation enables cells to act collectively to redistribute mass along the axis of stretch, helping to return the monolayer to its resting state. Further, this behavior could be quantitatively reproduced using a model designed to assess the impact of autonomous changes in mitotic cell mechanics within a stretched monolayer. In summary, the propensity of cells to divide along their long axis preserves epithelial homeostasis by facilitating both stress relaxation and isotropic growth without the need for cells to read or transduce mechanical signals.

Keywords: cell division; mechanical feedback; mitotic rounding; morphogenesis; quantitative biology.

Conflict of interest statement

The authors declare no conflict of interest.

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. 2014 Dec;30(12):1061-3.
doi: 10.1051/medsci/20143012002. Epub 2014 Dec 24.

[Auxetic nuclei in embryonic stem cells]

[Article in French]
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Free article

[Auxetic nuclei in embryonic stem cells]

[Article in French]
Alexandre J Kabla et al. Med Sci (Paris). 2014 Dec.
Free article
No abstract available

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. 2014 Dec 6;4(6):20140013.
doi: 10.1098/rsfs.2014.0013.

A kinetic mechanism for cell sorting based on local variations in cell motility

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A kinetic mechanism for cell sorting based on local variations in cell motility

Charlotte Strandkvist et al. Interface Focus. .

Abstract

Our current understanding of cell sorting relies on physical difference, either in the interfacial properties or motile force, between cell types. But is such asymmetry a prerequisite for cell sorting? We test this using a minimal model in which the two cell populations are identical with respect to their physical properties and differences in motility arise solely from how cells interact with their surroundings. The model resembles the Schelling model used in social sciences to study segregation phenomena at the scale of societies. Our results demonstrate that segregation can emerge solely from cell motility being a dynamic property that changes in response to the local environment of the cell, but that additional mechanisms are necessary to reproduce the envelopment behaviour observed in vitro. The time course of segregation follows a power law, in agreement with the scaling reported from experiment and in other models of motility-driven segregation.

Keywords: cell motility; cell sorting; differential adhesion; segregation.

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. 2014 Jul 7;206(1):113-27.
doi: 10.1083/jcb.201402093.

In vivo collective cell migration requires an LPAR2-dependent increase in tissue fluidity

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In vivo collective cell migration requires an LPAR2-dependent increase in tissue fluidity

Sei Kuriyama et al. J Cell Biol. .

Abstract

Collective cell migration (CCM) and epithelial-mesenchymal transition (EMT) are common to cancer and morphogenesis, and are often considered to be mutually exclusive in spite of the fact that many cancer and embryonic cells that have gone through EMT still cooperate to migrate collectively. Here we use neural crest (NC) cells to address the question of how cells that have down-regulated cell-cell adhesions can migrate collectively. NC cell dissociation relies on a qualitative and quantitative change of the cadherin repertoire. We found that the level of cell-cell adhesion is precisely regulated by internalization of N-cadherin downstream of lysophosphatidic acid (LPA) receptor 2. Rather than promoting the generation of single, fully mesenchymal cells, this reduction of membrane N-cadherin only triggers a partial mesenchymal phenotype. This intermediate phenotype is characterized by an increase in tissue fluidity akin to a solid-like-to-fluid-like transition. This change of plasticity allows cells to migrate under physical constraints without abolishing cell cooperation required for collectiveness.

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. 2014 Jun;13(6):638-644.
doi: 10.1038/nmat3943. Epub 2014 Apr 20.

Auxetic nuclei in embryonic stem cells exiting pluripotency

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Auxetic nuclei in embryonic stem cells exiting pluripotency

Stefano Pagliara et al. Nat Mater. 2014 Jun.

Abstract

Embryonic stem cells (ESCs) self-renew in a state of naïve pluripotency in which they are competent to generate all somatic cells. It has been hypothesized that, before irreversibly committing, ESCs pass through at least one metastable transition state. This transition would represent a gateway for differentiation and reprogramming of somatic cells. Here, we show that during the transition, the nuclei of ESCs are auxetic: they exhibit a cross-sectional expansion when stretched and a cross-sectional contraction when compressed, and their stiffness increases under compression. We also show that the auxetic phenotype of transition ESC nuclei is driven at least in part by global chromatin decondensation. Through the regulation of molecular turnover in the differentiating nucleus by external forces, auxeticity could be a key element in mechanotransduction. Our findings highlight the importance of nuclear structure in the regulation of differentiation and reprogramming.

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. 2014 Feb 4;111(5):1807-12.
doi: 10.1073/pnas.1321852111. Epub 2014 Jan 21.

Nonautonomous contact guidance signaling during collective cell migration

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Nonautonomous contact guidance signaling during collective cell migration

Camila Londono et al. Proc Natl Acad Sci U S A. .

Abstract

Directed migration of groups of cells is a critical aspect of tissue morphogenesis that ensures proper tissue organization and, consequently, function. Cells moving in groups, unlike single cells, must coordinate their migratory behavior to maintain tissue integrity. During directed migration, cells are guided by a combination of mechanical and chemical cues presented by neighboring cells and the surrounding extracellular matrix. One important class of signals that guide cell migration includes topographic cues. Although the contact guidance response of individual cells to topographic cues has been extensively characterized, little is known about the response of groups of cells to topographic cues, the impact of such cues on cell-cell coordination within groups, and the transmission of nonautonomous contact guidance information between neighboring cells. Here, we explore these phenomena by quantifying the migratory response of confluent monolayers of epithelial and fibroblast cells to contact guidance cues provided by grooved topography. We show that, in both sparse clusters and confluent sheets, individual cells are contact-guided by grooves and show more coordinated behavior on grooved versus flat substrates. Furthermore, we demonstrate both in vitro and in silico that the guidance signal provided by a groove can propagate between neighboring cells in a confluent monolayer, and that the distance over which signal propagation occurs is not significantly influenced by the strength of cell-cell junctions but is an emergent property, similar to cellular streaming, triggered by mechanical exclusion interactions within the collective system.

Keywords: correlation length; emergent behavior; group coordination; mechanical signal propagation.

Conflict of interest statement

The authors declare no conflict of interest.

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. 2013 Dec;8(12):2516-30.
doi: 10.1038/nprot.2013.151. Epub 2013 Nov 21.

Generating suspended cell monolayers for mechanobiological studies

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Generating suspended cell monolayers for mechanobiological studies

Andrew R Harris et al. Nat Protoc. 2013 Dec.

Abstract

Cell monolayers line most of the surfaces and cavities in the human body. During development and normal physiology, monolayers sustain, detect and generate mechanical stresses, yet little is known about their mechanical properties. We describe a cell culture and mechanical testing protocol for generating freely suspended cell monolayers and examining their mechanical and biological response to uniaxial stretch. Cells are cultured on temporary collagen scaffolds polymerized between two parallel glass capillaries. Once cells form a monolayer covering the collagen and the capillaries, the scaffold is removed with collagenase, leaving the monolayer suspended between the test rods. The suspended monolayers are subjected to stretching by prying the capillaries apart with a micromanipulator. The applied force can be measured for the characterization of monolayer mechanics. Monolayers can be imaged with standard optical microscopy to examine changes in cell morphology and subcellular organization concomitant with stretch. The entire preparation and testing protocol requires 3-4 d.

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. 2013 Aug;5(8):1026-35.
doi: 10.1039/c3ib40054a.

Guidance of collective cell migration by substrate geometry

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Guidance of collective cell migration by substrate geometry

Kevin Doxzen et al. Integr Biol (Camb). 2013 Aug.

Abstract

Collective behavior refers to the emergence of complex migration patterns over scales larger than those of the individual elements constituting a system. It plays a pivotal role in biological systems in regulating various processes such as gastrulation, morphogenesis and tissue organization. Here, by combining experimental approaches and numerical modeling, we explore the role of cell density ('crowding'), strength of intercellular adhesion ('cohesion') and boundary conditions imposed by extracellular matrix (ECM) proteins ('constraints') in regulating the emergence of collective behavior within epithelial cell sheets. Our results show that the geometrical confinement of cells into well-defined circles induces a persistent, coordinated and synchronized rotation of cells that depends on cell density. The speed of such rotating large-scale movements slows down as the density increases. Furthermore, such collective rotation behavior depends on the size of the micropatterned circles: we observe a rotating motion of the overall cell population in the same direction for sizes of up to 200 μm. The rotating cells move as a solid body, with a uniform angular velocity. Interestingly, this upper limit leads to length scales that are similar to the natural correlation length observed for unconfined epithelial cell sheets. This behavior is strongly altered in cells that present a downregulation of adherens junctions and in cancerous cell types. We anticipate that our system provides a simple and easy approach to investigate collective cell behavior in a well-controlled and systematic manner.

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. 2012 Oct 9;109(41):16449-54.
doi: 10.1073/pnas.1213301109. Epub 2012 Sep 18.

Characterizing the mechanics of cultured cell monolayers

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Characterizing the mechanics of cultured cell monolayers

Andrew R Harris et al. Proc Natl Acad Sci U S A. .

Abstract

One-cell-thick monolayers are the simplest tissues in multicellular organisms, yet they fulfill critical roles in development and normal physiology. In early development, embryonic morphogenesis results largely from monolayer rearrangement and deformation due to internally generated forces. Later, monolayers act as physical barriers separating the internal environment from the exterior and must withstand externally applied forces. Though resisting and generating mechanical forces is an essential part of monolayer function, simple experimental methods to characterize monolayer mechanical properties are lacking. Here, we describe a system for tensile testing of freely suspended cultured monolayers that enables the examination of their mechanical behavior at multi-, uni-, and subcellular scales. Using this system, we provide measurements of monolayer elasticity and show that this is two orders of magnitude larger than the elasticity of their isolated cellular components. Monolayers could withstand more than a doubling in length before failing through rupture of intercellular junctions. Measurement of stress at fracture enabled a first estimation of the average force needed to separate cells within truly mature monolayers, approximately ninefold larger than measured in pairs of isolated cells. As in single cells, monolayer mechanical properties were strongly dependent on the integrity of the actin cytoskeleton, myosin, and intercellular adhesions interfacing adjacent cells. High magnification imaging revealed that keratin filaments became progressively stretched during extension, suggesting they participate in monolayer mechanics. This multiscale study of monolayer response to deformation enabled by our device provides the first quantitative investigation of the link between monolayer biology and mechanics.

Conflict of interest statement

The authors declare no conflict of interest.

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. 2012 Dec 7;9(77):3268-78.
doi: 10.1098/rsif.2012.0448. Epub 2012 Jul 25.

Collective cell migration: leadership, invasion and segregation

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Collective cell migration: leadership, invasion and segregation

Alexandre J Kabla. J R Soc Interface. .

Abstract

A number of biological processes, such as embryo development, cancer metastasis or wound healing, rely on cells moving in concert. The mechanisms leading to the emergence of coordinated motion remain however largely unexplored. Although biomolecular signalling is known to be involved in most occurrences of collective migration, the role of physical and mechanical interactions has only been recently investigated. In this study, a versatile framework for cell motility is implemented in silico in order to study the minimal requirements for the coordination of a group of epithelial cells. We find that cell motility and cell-cell mechanical interactions are sufficient to generate a broad array of behaviours commonly observed in vitro and in vivo. Cell streaming, sheet migration and susceptibility to leader cells are examples of behaviours spontaneously emerging from these simple assumptions, which might explain why collective effects are so ubiquitous in nature. The size of the population and its confinement appear, in particular, to play an important role in the coordination process. In all cases, the complex response of the population can be predicted from the knowledge of the correlation length of the velocity field measured in the bulk of the epithelial layer. This analysis provides also new insights into cancer metastasis and cell sorting, suggesting, in particular, that collective invasion might result from an emerging coordination in a system where single cells are mechanically unable to invade.

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. 2012 Aug 7;109(32):12974-9.
doi: 10.1073/pnas.1119313109. Epub 2012 Jul 19.

Emerging modes of collective cell migration induced by geometrical constraints

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Emerging modes of collective cell migration induced by geometrical constraints

Sri Ram Krishna Vedula et al. Proc Natl Acad Sci U S A. .

Abstract

The role of geometrical confinement on collective cell migration has been recognized but has not been elucidated yet. Here, we show that the geometrical properties of the environment regulate the formation of collective cell migration patterns through cell-cell interactions. Using microfabrication techniques to allow epithelial cell sheets to migrate into strips whose width was varied from one up to several cell diameters, we identified the modes of collective migration in response to geometrical constraints. We observed that a decrease in the width of the strips is accompanied by an overall increase in the speed of the migrating cell sheet. Moreover, large-scale vortices over tens of cell lengths appeared in the wide strips whereas a contraction-elongation type of motion is observed in the narrow strips. Velocity fields and traction force signatures within the cellular population revealed migration modes with alternative pulling and/or pushing mechanisms that depend on extrinsic constraints. Force transmission through intercellular contacts plays a key role in this process because the disruption of cell-cell junctions abolishes directed collective migration and passive cell-cell adhesions tend to move the cells uniformly together independent of the geometry. Altogether, these findings not only demonstrate the existence of patterns of collective cell migration depending on external constraints but also provide a mechanical explanation for how large-scale interactions through cell-cell junctions can feed back to regulate the organization of migrating tissues.

Conflict of interest statement

The authors declare no conflict of interest.

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. 2012 Jul;8(7):2730-6.
doi: 10.1016/j.actbio.2012.04.008. Epub 2012 Apr 9.

In vivo dynamics of the internal fibrous structure in smooth adhesive pads of insects

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In vivo dynamics of the internal fibrous structure in smooth adhesive pads of insects

Jan-Henning Dirks et al. Acta Biomater. 2012 Jul.

Abstract

Many insects with smooth adhesive pads can rapidly enlarge their contact area by centripetal pulls on the legs, allowing them to cope with sudden mechanical perturbations such as gusts of wind or raindrops. The short time scale of this reaction excludes any neuromuscular control; it is thus more likely to be caused by mechanical properties of the pad's specialized cuticle. This soft cuticle contains numerous branched fibrils oriented almost perpendicularly to the surface. Assuming a fixed volume of the water-filled cuticle, we hypothesized that pulls could decrease the fibril angle, thereby helping the contact area to expand laterally and longitudinally. Three-dimensional fluorescence microscopy on the cuticle of smooth stick insect pads confirmed that pulls significantly reduced the fibril angle. However, the fibril angle variation appeared insufficient to explain the observed increase in contact area. Direct strain measurements in the contact zone demonstrated that pulls not only expand the cuticle laterally, but also add new contact area at the pad's outer edge.

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. 2009 Jun 5;102(22):228301.
doi: 10.1103/PhysRevLett.102.228301. Epub 2009 Jun 3.

Dilatancy in slow granular flows

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Dilatancy in slow granular flows

Alexandre J Kabla et al. Phys Rev Lett. .

Abstract

When walking on wet sand, each footstep leaves behind a temporarily dry impression. This counterintuitive observation is the most common illustration of the Reynolds principle of dilatancy: that is, a granular packing tends to expand as it is deformed, therefore increasing the amount of porous space. Although widely called upon in areas such as soil mechanics and geotechnics, a deeper understanding of this principle is constrained by the lack of analytical tools to study this behavior. Using x-ray radiography, we track a broad variety of granular flow profiles and quantify their intrinsic dilatancy behavior. These measurements frame Reynolds dilatancy as a kinematic process. Closer inspection demonstrates, however, the practical importance of flow induced compaction which competes with dilatancy, leading more complex flow properties than expected.

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. 2009 Jun 16;4(6):e5902.
doi: 10.1371/journal.pone.0005902.

Strain-induced alignment in collagen gels

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Strain-induced alignment in collagen gels

David Vader et al. PLoS One. .

Abstract

Collagen is the most abundant extracellular-network-forming protein in animal biology and is important in both natural and artificial tissues, where it serves as a material of great mechanical versatility. This versatility arises from its almost unique ability to remodel under applied loads into anisotropic and inhomogeneous structures. To explore the origins of this property, we develop a set of analysis tools and a novel experimental setup that probes the mechanical response of fibrous networks in a geometry that mimics a typical deformation profile imposed by cells in vivo. We observe strong fiber alignment and densification as a function of applied strain for both uncrosslinked and crosslinked collagenous networks. This alignment is found to be irreversibly imprinted in uncrosslinked collagen networks, suggesting a simple mechanism for tissue organization at the microscale. However, crosslinked networks display similar fiber alignment and the same geometrical properties as uncrosslinked gels, but with full reversibility. Plasticity is therefore not required to align fibers. On the contrary, our data show that this effect is part of the fundamental non-linear properties of fibrous biological networks.

Conflict of interest statement

Competing Interests: The authors have declared that no competing interests exist.

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. 2009 Jul;11(7):859-64.
doi: 10.1038/ncb1894. Epub 2009 Jun 7.

Cell shape changes indicate a role for extrinsic tensile forces in Drosophila germ-band extension

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Cell shape changes indicate a role for extrinsic tensile forces in Drosophila germ-band extension

Lucy C Butler et al. Nat Cell Biol. 2009 Jul.

Abstract

Drosophila germ-band extension (GBE) is an example of the convergence and extension movements that elongate and narrow embryonic tissues. To understand the collective cell behaviours underlying tissue morphogenesis, we have continuously quantified cell intercalation and cell shape change during GBE. We show that the fast, early phase of GBE depends on cell shape change in addition to cell intercalation. In antero-posterior patterning mutants such as those for the gap gene Krüppel, defective polarized cell intercalation is compensated for by an increase in antero-posterior cell elongation, such that the initial rate of extension remains the same. Spatio-temporal patterns of cell behaviours indicate that an antero-posterior tensile force deforms the germ band, causing the cells to change shape passively. The rate of antero-posterior cell elongation is reduced in twist mutant embryos, which lack mesoderm. We propose that cell shape change contributing to germ-band extension is a passive response to mechanical forces caused by the invaginating mesoderm.

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. 2009 Jun;6(6):458-64.
doi: 10.1038/nmeth.1327. Epub 2009 May 3.

Tissue tectonics: morphogenetic strain rates, cell shape change and intercalation

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Tissue tectonics: morphogenetic strain rates, cell shape change and intercalation

Guy B Blanchard et al. Nat Methods. 2009 Jun.

Abstract

The dynamic reshaping of tissues during morphogenesis results from a combination of individual cell behaviors and collective cell rearrangements. However, a comprehensive framework to unambiguously measure and link cell behavior to tissue morphogenesis is lacking. Here we introduce such a kinematic framework, bridging cell and tissue behaviors at an intermediate, mesoscopic, level of cell clusters or domains. By measuring domain deformation in terms of the relative motion of cell positions and the evolution of their shapes, we characterized the basic invariant quantities that measure fundamental classes of cell behavior, namely tensorial rates of cell shape change and cell intercalation. In doing so we introduce an explicit definition of cell intercalation as a continuous process. We mapped strain rates spatiotemporally in three models of tissue morphogenesis, gaining insight into morphogenetic mechanisms. Our quantitative approach has broad relevance for the precise characterization and comparison of morphogenetic phenotypes.

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. 2008 Nov 21;101(21):215501.
doi: 10.1103/PhysRevLett.101.215501. Epub 2008 Nov 19.

Elasticity of floppy and stiff random networks

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Elasticity of floppy and stiff random networks

M Wyart et al. Phys Rev Lett. .

Abstract

We study the linear and nonlinear elastic behavior of amorphous systems using a two-dimensional random network of harmonic springs as a model system. A natural characterization of these systems arises in terms of the network coordination (average number of springs per node) relative to that of a marginally rigid network deltaz: a floppy network has deltaz<0, while a stiff network has deltaz>0. Under the influence of an externally applied load, we observe that the response of both floppy and stiff networks is controlled by the critical point corresponding to the onset of rigidity. We use numerical simulations to compute the exponents which characterize the shear modulus, the heterogeneity of the response, and the network stiffening as a function of deltaz and derive these theoretically, thus allowing us to predict aspects of the mechanical response of glasses and fibrous networks.

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. 2007 Nov;14(11):1298-309.
doi: 10.1016/j.acra.2007.07.011.

Real-time tracking and shape analysis of atrial septal defects in 3D echocardiography

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Real-time tracking and shape analysis of atrial septal defects in 3D echocardiography

Marius George Linguraru et al. Acad Radiol. 2007 Nov.

Abstract

Rationale and objectives: Real-time cardiac ultrasound (US) allows monitoring the heart motion during intracardiac beating heart procedures. Our application assists pediatric atrial septal defect (ASD) closure techniques using real-time 3D US guidance and rigid instruments. ASD tracking is also an important tool for facilitating systematic clinical studies of the dynamic behavior of the intra-atrial communication. One major image processing challenge is associated with the required processing of information at high frame rate, especially given the low image quality.

Materials and methods: We present an optimization scheme for a block flow technique, which combines the probability-based velocity computation for an entire block (a 3D volume centered on the ASD) with cyclic template matching. The adapted similarity imposes constraints both locally (from frame to frame) to conserve energy, and globally (from a reference template) to minimize cumulative errors. The algorithm is optimized for fast and reliable results. For tests, we use three intra-operational 4D ultrasound sequences of clinical infant beating hearts with ASD.

Results: Computing velocity at the block level with an optimized scheme, our technique tracks ASD motion at a frequency of 60 frames/s on clinical 4D datasets. Results are stable and accurate for changes in resolution and block size. In particular, we show robust real-time tracking and preliminary segmentation results of the ASD shape, size and orientation as a function of time.

Conclusions: We present an optimized block flow technique for real-time tracking of ASD to assist in minimally invasive beating heart surgery. Our method proposes the standard use of references for processing repetitive data. This paper represents, to our knowledge, the first study on the dynamic morphology of ASD that takes into account the angular effect introduced by the slanted position of the intra-atrial communication with respect to the US probe.

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. 2007 Feb 22;4(12):99-106.
doi: 10.1098/rsif.2006.0151.

Nonlinear mechanics of soft fibrous networks

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Nonlinear mechanics of soft fibrous networks

A Kabla et al. J R Soc Interface. .

Abstract

Mechanical networks of fibres arise on a range of scales in nature and technology, from the cytoskeleton of a cell to blood clots, from textiles and felts to skin and collageneous tissues. Their collective response is dependent on the individual response of the constituent filaments as well as density, topology and order in the network. Here, we use the example of a low-density synthetic felt of athermal filaments to study the generic features of the mechanical response of such networks including strain stiffening and large effective Poisson ratios. A simple microscopic model allows us to explain these features of our observations, and provides us with a baseline framework to understand active biomechanical networks.

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. 2004 Jan 23;92(3):035501.
doi: 10.1103/PhysRevLett.92.035501. Epub 2004 Jan 22.

Contact dynamics in a gently vibrated granular pile

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Contact dynamics in a gently vibrated granular pile

Alexandre Kabla et al. Phys Rev Lett. .

Abstract

We use multispeckle diffusive wave spectroscopy to probe the micron-scale dynamics of a water-saturated granular pile submitted to discrete gentle taps. The typical time scale between plastic events is found to increase dramatically with the number of applied taps. Furthermore, this microscopic dynamics weakly depends on the solid fraction of the sample. This process is largely analogous to the aging phenomenon observed in thermal glassy systems. We propose a heuristic model where this slowing-down mechanism is associated with a slow evolution of the distribution of the contact forces between particles. This model accounts for the main features of the observed dynamics.

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. 2003 Jun 27;90(25 Pt 1):258303.
doi: 10.1103/PhysRevLett.90.258303. Epub 2003 Jun 27.

Local stress relaxation and shear banding in a dry foam under shear

Affiliations

Local stress relaxation and shear banding in a dry foam under shear

Alexandre Kabla et al. Phys Rev Lett. .

Abstract

We have developed a realistic simulation of 2D dry foams under quasistatic shear. After a short transient, a shear-banding instability is observed. These results are compared with measurements obtained on real 2D (confined) foams. The numerical model allows us to exhibit the mechanical response of the material to a single plastication event. From the analysis of this elastic propagator, we propose a scenario for the onset and stability of the flow localization process in foams, which should remain valid for most athermal amorphous systems under creep flow.

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