Kozlenkov A - Search Results

1

Evolution of regulatory signatures in primate cortical neurons at cell-type resolution.

Kozlenkov A, Vermunt MW, Apontes P, Li J, Hao K, Sherwood CC, Hof PR, Ely JJ, Wegner M, Mukamel EA, Creyghton MP, Koonin EV, Dracheva S. Kozlenkov A, et al. Proc Natl Acad Sci U S A. 2020 Nov 10;117(45):28422-28432. doi: 10.1073/pnas.2011884117. Epub 2020 Oct 27. Proc Natl Acad Sci U S A. 2020. PMID: 33109720 Free PMC article.

2

Differences in DNA methylation between human neuronal and glial cells are concentrated in enhancers and non-CpG sites.

Kozlenkov A, Roussos P, Timashpolsky A, Barbu M, Rudchenko S, Bibikova M, Klotzle B, Byne W, Lyddon R, Di Narzo AF, Hurd YL, Koonin EV, Dracheva S. Kozlenkov A, et al. Nucleic Acids Res. 2014 Jan;42(1):109-27. doi: 10.1093/nar/gkt838. Epub 2013 Sep 20. Nucleic Acids Res. 2014. PMID: 24057217 Free PMC article.

3

A unique gene expression signature associated with serotonin 2C receptor RNA editing in the prefrontal cortex and altered in suicide.

Di Narzo AF, Kozlenkov A, Roussos P, Hao K, Hurd Y, Lewis DA, Sibille E, Siever LJ, Koonin E, Dracheva S. Di Narzo AF, et al. Among authors: kozlenkov a. Hum Mol Genet. 2014 Sep 15;23(18):4801-13. doi: 10.1093/hmg/ddu195. Epub 2014 Apr 29. Hum Mol Genet. 2014. PMID: 24781207 Free PMC article.

4

Decrease of mRNA Editing after Spinal Cord Injury is Caused by Down-regulation of ADAR2 that is Triggered by Inflammatory Response.

Di Narzo AF, Kozlenkov A, Ge Y, Zhang B, Sanelli L, May Z, Li Y, Fouad K, Cardozo C, Koonin EV, Bennett DJ, Dracheva S. Di Narzo AF, et al. Among authors: kozlenkov a. Sci Rep. 2015 Jul 30;5:12615. doi: 10.1038/srep12615. Sci Rep. 2015. PMID: 26223940 Free PMC article.

5

The PsychENCODE project.

PsychENCODE Consortium; Akbarian S, Liu C, Knowles JA, Vaccarino FM, Farnham PJ, Crawford GE, Jaffe AE, Pinto D, Dracheva S, Geschwind DH, Mill J, Nairn AC, Abyzov A, Pochareddy S, Prabhakar S, Weissman S, Sullivan PF, State MW, Weng Z, Peters MA, White KP, Gerstein MB, Amiri A, Armoskus C, Ashley-Koch AE, Bae T, Beckel-Mitchener A, Berman BP, Coetzee GA, Coppola G, Francoeur N, Fromer M, Gao R, Grennan K, Herstein J, Kavanagh DH, Ivanov NA, Jiang Y, Kitchen RR, Kozlenkov A, Kundakovic M, Li M, Li Z, Liu S, Mangravite LM, Mattei E, Markenscoff-Papadimitriou E, Navarro FC, North N, Omberg L, Panchision D, Parikshak N, Poschmann J, Price AJ, Purcaro M, Reddy TE, Roussos P, Schreiner S, Scuderi S, Sebra R, Shibata M, Shieh AW, Skarica M, Sun W, Swarup V, Thomas A, Tsuji J, van Bakel H, Wang D, Wang Y, Wang K, Werling DM, Willsey AJ, Witt H, Won H, Wong CC, Wray GA, Wu EY, Xu X, Yao L, Senthil G, Lehner T, Sklar P, Sestan N. PsychENCODE Consortium, et al. Among authors: kozlenkov a. Nat Neurosci. 2015 Dec;18(12):1707-12. doi: 10.1038/nn.4156. Nat Neurosci. 2015. PMID: 26605881 Free PMC article. Review.

6

Substantial DNA methylation differences between two major neuronal subtypes in human brain.

Kozlenkov A, Wang M, Roussos P, Rudchenko S, Barbu M, Bibikova M, Klotzle B, Dwork AJ, Zhang B, Hurd YL, Koonin EV, Wegner M, Dracheva S. Kozlenkov A, et al. Nucleic Acids Res. 2016 Apr 7;44(6):2593-612. doi: 10.1093/nar/gkv1304. Epub 2015 Nov 26. Nucleic Acids Res. 2016. PMID: 26612861 Free PMC article.

7

NeuN+ neuronal nuclei in non-human primate prefrontal cortex and subcortical white matter after clozapine exposure.

Halene TB, Kozlenkov A, Jiang Y, Mitchell AC, Javidfar B, Dincer A, Park R, Wiseman J, Croxson PL, Giannaris EL, Hof PR, Roussos P, Dracheva S, Hemby SE, Akbarian S. Halene TB, et al. Among authors: kozlenkov a. Schizophr Res. 2016 Feb;170(2-3):235-44. doi: 10.1016/j.schres.2015.12.016. Epub 2016 Jan 6. Schizophr Res. 2016. PMID: 26776227 Free PMC article.

8

Genetic variants near MLST8 and DHX57 affect the epigenetic age of the cerebellum.

Lu AT, Hannon E, Levine ME, Hao K, Crimmins EM, Lunnon K, Kozlenkov A, Mill J, Dracheva S, Horvath S. Lu AT, et al. Among authors: kozlenkov a. Nat Commun. 2016 Feb 2;7:10561. doi: 10.1038/ncomms10561. Nat Commun. 2016. PMID: 26830004 Free PMC article.

9

DNA Methylation Profiling of Human Prefrontal Cortex Neurons in Heroin Users Shows Significant Difference between Genomic Contexts of Hyper- and Hypomethylation and a Younger Epigenetic Age.

Kozlenkov A, Jaffe AE, Timashpolsky A, Apontes P, Rudchenko S, Barbu M, Byne W, Hurd YL, Horvath S, Dracheva S. Kozlenkov A, et al. Genes (Basel). 2017 May 30;8(6):152. doi: 10.3390/genes8060152. Genes (Basel). 2017. PMID: 28556790 Free PMC article.

10

A Novel Method for Rapid Molecular Subgrouping of Medulloblastoma.

Gómez S, Garrido-Garcia A, Garcia-Gerique L, Lemos I, Suñol M, de Torres C, Kulis M, Pérez-Jaume S, Carcaboso ÁM, Luu B, Kieran MW, Jabado N, Kozlenkov A, Dracheva S, Ramaswamy V, Hovestadt V, Johann P, Jones DTW, Pfister SM, Morales La Madrid A, Cruz O, Taylor MD, Martin-Subero JI, Mora J, Lavarino C. Gómez S, et al. Among authors: kozlenkov a. Clin Cancer Res. 2018 Mar 15;24(6):1355-1363. doi: 10.1158/1078-0432.CCR-17-2243. Epub 2018 Jan 19. Clin Cancer Res. 2018. PMID: 29351917

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