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Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer.
McBride DS, Garushyants SK, Franks J, Magee AF, Overend SH, Huey D, Williams AM, Faith SA, Kandeil A, Trifkovic S, Miller L, Jeevan T, Patel A, Nolting JM, Tonkovich MJ, Genders JT, Montoney AJ, Kasnyik K, Linder TJ, Bevins SN, Lenoch JB, Chandler JC, DeLiberto TJ, Koonin EV, Suchard MA, Lemey P, Webby RJ, Nelson MI, Bowman AS. McBride DS, et al. Among authors: lemey p. Nat Commun. 2023 Aug 28;14(1):5105. doi: 10.1038/s41467-023-40706-y. Nat Commun. 2023. PMID: 37640694 Free PMC article.
Bayesian phylogeography finds its roots.
Lemey P, Rambaut A, Drummond AJ, Suchard MA. Lemey P, et al. PLoS Comput Biol. 2009 Sep;5(9):e1000520. doi: 10.1371/journal.pcbi.1000520. Epub 2009 Sep 25. PLoS Comput Biol. 2009. PMID: 19779555 Free PMC article.
Three roads diverged? Routes to phylogeographic inference.
Bloomquist EW, Lemey P, Suchard MA. Bloomquist EW, et al. Among authors: lemey p. Trends Ecol Evol. 2010 Nov;25(11):626-32. doi: 10.1016/j.tree.2010.08.010. Epub 2010 Sep 20. Trends Ecol Evol. 2010. PMID: 20863591 Free PMC article.
Impact of CCR5delta32 host genetic background and disease progression on HIV-1 intrahost evolutionary processes: efficient hypothesis testing through hierarchical phylogenetic models.
Edo-Matas D, Lemey P, Tom JA, Serna-Bolea C, van den Blink AE, van 't Wout AB, Schuitemaker H, Suchard MA. Edo-Matas D, et al. Among authors: lemey p. Mol Biol Evol. 2011 May;28(5):1605-16. doi: 10.1093/molbev/msq326. Epub 2010 Dec 6. Mol Biol Evol. 2011. PMID: 21135151 Free PMC article.
Phylodynamics of the HIV-1 CRF02_AG clade in Cameroon.
Faria NR, Suchard MA, Abecasis A, Sousa JD, Ndembi N, Bonfim I, Camacho RJ, Vandamme AM, Lemey P. Faria NR, et al. Among authors: lemey p. Infect Genet Evol. 2012 Mar;12(2):453-60. doi: 10.1016/j.meegid.2011.04.028. Epub 2011 May 4. Infect Genet Evol. 2012. PMID: 21565285 Free PMC article.
Spatial dynamics of human-origin H1 influenza A virus in North American swine.
Nelson MI, Lemey P, Tan Y, Vincent A, Lam TT, Detmer S, Viboud C, Suchard MA, Rambaut A, Holmes EC, Gramer M. Nelson MI, et al. Among authors: lemey p. PLoS Pathog. 2011 Jun;7(6):e1002077. doi: 10.1371/journal.ppat.1002077. Epub 2011 Jun 9. PLoS Pathog. 2011. PMID: 21695237 Free PMC article.
349 results