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Substantial viral diversity in bats and rodents from East Africa: insights into evolution, recombination, and cocirculation.
Wang D, Yang X, Ren Z, Hu B, Zhao H, Yang K, Shi P, Zhang Z, Feng Q, Nawenja CV, Obanda V, Robert K, Nalikka B, Waruhiu CN, Ochola GO, Onyuok SO, Ochieng H, Li B, Zhu Y, Si H, Yin J, Kristiansen K, Jin X, Xu X, Xiao M, Agwanda B, Ommeh S, Li J, Shi ZL. Wang D, et al. Among authors: li j, li b. Microbiome. 2024 Apr 10;12(1):72. doi: 10.1186/s40168-024-01782-4. Microbiome. 2024. PMID: 38600530 Free PMC article.
High-fat feeding rather than obesity drives taxonomical and functional changes in the gut microbiota in mice.
Xiao L, Sonne SB, Feng Q, Chen N, Xia Z, Li X, Fang Z, Zhang D, Fjære E, Midtbø LK, Derrien M, Hugenholtz F, Tang L, Li J, Zhang J, Liu C, Hao Q, Vogel UB, Mortensen A, Kleerebezem M, Licht TR, Yang H, Wang J, Li Y, Arumugam M, Wang J, Madsen L, Kristiansen K. Xiao L, et al. Among authors: li y, li j, li x. Microbiome. 2017 Apr 8;5(1):43. doi: 10.1186/s40168-017-0258-6. Microbiome. 2017. PMID: 28390422 Free PMC article.
1,520 reference genomes from cultivated human gut bacteria enable functional microbiome analyses.
Zou Y, Xue W, Luo G, Deng Z, Qin P, Guo R, Sun H, Xia Y, Liang S, Dai Y, Wan D, Jiang R, Su L, Feng Q, Jie Z, Guo T, Xia Z, Liu C, Yu J, Lin Y, Tang S, Huo G, Xu X, Hou Y, Liu X, Wang J, Yang H, Kristiansen K, Li J, Jia H, Xiao L. Zou Y, et al. Among authors: li j. Nat Biotechnol. 2019 Feb;37(2):179-185. doi: 10.1038/s41587-018-0008-8. Epub 2019 Feb 4. Nat Biotechnol. 2019. PMID: 30718868 Free PMC article.
Multiple approaches for massively parallel sequencing of SARS-CoV-2 genomes directly from clinical samples.
Xiao M, Liu X, Ji J, Li M, Li J, Yang L, Sun W, Ren P, Yang G, Zhao J, Liang T, Ren H, Chen T, Zhong H, Song W, Wang Y, Deng Z, Zhao Y, Ou Z, Wang D, Cai J, Cheng X, Feng T, Wu H, Gong Y, Yang H, Wang J, Xu X, Zhu S, Chen F, Zhang Y, Chen W, Li Y, Li J. Xiao M, et al. Among authors: li y, li j, li m. Genome Med. 2020 Jun 30;12(1):57. doi: 10.1186/s13073-020-00751-4. Genome Med. 2020. PMID: 32605661 Free PMC article.
Intra-host variation and evolutionary dynamics of SARS-CoV-2 populations in COVID-19 patients.
Wang Y, Wang D, Zhang L, Sun W, Zhang Z, Chen W, Zhu A, Huang Y, Xiao F, Yao J, Gan M, Li F, Luo L, Huang X, Zhang Y, Wong SS, Cheng X, Ji J, Ou Z, Xiao M, Li M, Li J, Ren P, Deng Z, Zhong H, Xu X, Song T, Mok CKP, Peiris M, Zhong N, Zhao J, Li Y, Li J, Zhao J. Wang Y, et al. Among authors: li f, li y, li j, li m. Genome Med. 2021 Feb 22;13(1):30. doi: 10.1186/s13073-021-00847-5. Genome Med. 2021. PMID: 33618765 Free PMC article.
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