Lu Y - Search Results

1

Architecture of epigenetic reprogramming following Twist1-mediated epithelial-mesenchymal transition.

Malouf GG, Taube JH, Lu Y, Roysarkar T, Panjarian S, Estecio MR, Jelinek J, Yamazaki J, Raynal NJ, Long H, Tahara T, Tinnirello A, Ramachandran P, Zhang XY, Liang S, Mani SA, Issa JP. Malouf GG, et al. Among authors: lu y. Genome Biol. 2013 Dec 24;14(12):R144. doi: 10.1186/gb-2013-14-12-r144. Genome Biol. 2013. PMID: 24367927 Free PMC article.

2

Analysis of epigenetic modifications by next generation sequencing.

Liang S, Lu Y, Jelinek J, Estecio M, Li H, Issa JP. Liang S, et al. Among authors: lu y. Annu Int Conf IEEE Eng Med Biol Soc. 2009;2009:6730. doi: 10.1109/IEMBS.2009.5332853. Annu Int Conf IEEE Eng Med Biol Soc. 2009. PMID: 19963934

3

Aberrant DNA methylation is associated with disease progression, resistance to imatinib and shortened survival in chronic myelogenous leukemia.

Jelinek J, Gharibyan V, Estecio MR, Kondo K, He R, Chung W, Lu Y, Zhang N, Liang S, Kantarjian HM, Cortes JE, Issa JP. Jelinek J, et al. Among authors: lu y. PLoS One. 2011;6(7):e22110. doi: 10.1371/journal.pone.0022110. Epub 2011 Jul 8. PLoS One. 2011. PMID: 21760961 Free PMC article.

4

Dnmt3a is essential for hematopoietic stem cell differentiation.

Challen GA, Sun D, Jeong M, Luo M, Jelinek J, Berg JS, Bock C, Vasanthakumar A, Gu H, Xi Y, Liang S, Lu Y, Darlington GJ, Meissner A, Issa JP, Godley LA, Li W, Goodell MA. Challen GA, et al. Among authors: lu y. Nat Genet. 2011 Dec 4;44(1):23-31. doi: 10.1038/ng.1009. Nat Genet. 2011. PMID: 22138693 Free PMC article.

5

SINE retrotransposons cause epigenetic reprogramming of adjacent gene promoters.

Estécio MR, Gallegos J, Dekmezian M, Lu Y, Liang S, Issa JP. Estécio MR, et al. Among authors: lu y. Mol Cancer Res. 2012 Oct;10(10):1332-42. doi: 10.1158/1541-7786.MCR-12-0351. Epub 2012 Sep 4. Mol Cancer Res. 2012. PMID: 22952045 Free PMC article.

6

Conserved DNA methylation patterns in healthy blood cells and extensive changes in leukemia measured by a new quantitative technique.

Jelinek J, Liang S, Lu Y, He R, Ramagli LS, Shpall EJ, Estecio MR, Issa JP. Jelinek J, et al. Among authors: lu y. Epigenetics. 2012 Dec 1;7(12):1368-78. doi: 10.4161/epi.22552. Epub 2012 Oct 17. Epigenetics. 2012. PMID: 23075513 Free PMC article.

7

Stabilization of the promoter nucleosomes in nucleosome-free regions by the yeast Cyc8-Tup1 corepressor.

Chen K, Wilson MA, Hirsch C, Watson A, Liang S, Lu Y, Li W, Dent SY. Chen K, et al. Among authors: lu y. Genome Res. 2013 Feb;23(2):312-22. doi: 10.1101/gr.141952.112. Epub 2012 Nov 2. Genome Res. 2013. PMID: 23124522 Free PMC article.

8

The epigenome of AML stem and progenitor cells.

Yamazaki J, Estecio MR, Lu Y, Long H, Malouf GG, Graber D, Huo Y, Ramagli L, Liang S, Kornblau SM, Jelinek J, Issa JP. Yamazaki J, et al. Among authors: lu y. Epigenetics. 2013 Jan;8(1):92-104. doi: 10.4161/epi.23243. Epub 2012 Dec 18. Epigenetics. 2013. PMID: 23249680 Free PMC article.

9

Accuracy of RNA-Seq and its dependence on sequencing depth.

Cai G, Li H, Lu Y, Huang X, Lee J, Müller P, Ji Y, Liang S. Cai G, et al. Among authors: lu y. BMC Bioinformatics. 2012;13 Suppl 13(Suppl 13):S5. doi: 10.1186/1471-2105-13-S13-S5. Epub 2012 Aug 24. BMC Bioinformatics. 2012. PMID: 23320920 Free PMC article.

10

Age-related epigenetic drift in the pathogenesis of MDS and AML.

Maegawa S, Gough SM, Watanabe-Okochi N, Lu Y, Zhang N, Castoro RJ, Estecio MR, Jelinek J, Liang S, Kitamura T, Aplan PD, Issa JP. Maegawa S, et al. Among authors: lu y. Genome Res. 2014 Apr;24(4):580-91. doi: 10.1101/gr.157529.113. Epub 2014 Jan 10. Genome Res. 2014. PMID: 24414704 Free PMC article.

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