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Cooperative development of logical modelling standards and tools with CoLoMoTo.
Naldi A, Monteiro PT, Müssel C; Consortium for Logical Models and Tools; Kestler HA, Thieffry D, Xenarios I, Saez-Rodriguez J, Helikar T, Chaouiya C. Naldi A, et al. Among authors: mussel c. Bioinformatics. 2015 Apr 1;31(7):1154-9. doi: 10.1093/bioinformatics/btv013. Epub 2015 Jan 25. Bioinformatics. 2015. PMID: 25619997
GiANT: gene set uncertainty in enrichment analysis.
Schmid F, Schmid M, Müssel C, Sträng JE, Buske C, Bullinger L, Kraus JM, Kestler HA. Schmid F, et al. Among authors: mussel c. Bioinformatics. 2016 Jun 15;32(12):1891-4. doi: 10.1093/bioinformatics/btw030. Epub 2016 Feb 1. Bioinformatics. 2016. PMID: 26833345
A model of the onset of the senescence associated secretory phenotype after DNA damage induced senescence.
Meyer P, Maity P, Burkovski A, Schwab J, Müssel C, Singh K, Ferreira FF, Krug L, Maier HJ, Wlaschek M, Wirth T, Kestler HA, Scharffetter-Kochanek K. Meyer P, et al. Among authors: mussel c. PLoS Comput Biol. 2017 Dec 4;13(12):e1005741. doi: 10.1371/journal.pcbi.1005741. eCollection 2017 Dec. PLoS Comput Biol. 2017. PMID: 29206223 Free PMC article.