Mutalik VK - Search Results

1

Insights into transcriptional regulation and sigma competition from an equilibrium model of RNA polymerase binding to DNA.

Grigorova IL, Phleger NJ, Mutalik VK, Gross CA. Grigorova IL, et al. Among authors: mutalik vk. Proc Natl Acad Sci U S A. 2006 Apr 4;103(14):5332-7. doi: 10.1073/pnas.0600828103. Epub 2006 Mar 27. Proc Natl Acad Sci U S A. 2006. PMID: 16567622 Free PMC article.

2

Promoter strength properties of the complete sigma E regulon of Escherichia coli and Salmonella enterica.

Mutalik VK, Nonaka G, Ades SE, Rhodius VA, Gross CA. Mutalik VK, et al. J Bacteriol. 2009 Dec;191(23):7279-87. doi: 10.1128/JB.01047-09. Epub 2009 Sep 25. J Bacteriol. 2009. PMID: 19783623 Free PMC article.

3

Predicting the strength of UP-elements and full-length E. coli σE promoters.

Rhodius VA, Mutalik VK, Gross CA. Rhodius VA, et al. Among authors: mutalik vk. Nucleic Acids Res. 2012 Apr;40(7):2907-24. doi: 10.1093/nar/gkr1190. Epub 2011 Dec 8. Nucleic Acids Res. 2012. PMID: 22156164 Free PMC article.

4

Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, sigmaE.

Rhodius VA, Mutalik VK. Rhodius VA, et al. Among authors: mutalik vk. Proc Natl Acad Sci U S A. 2010 Feb 16;107(7):2854-9. doi: 10.1073/pnas.0915066107. Epub 2010 Feb 1. Proc Natl Acad Sci U S A. 2010. PMID: 20133665 Free PMC article.

5

Versatile RNA-sensing transcriptional regulators for engineering genetic networks.

Lucks JB, Qi L, Mutalik VK, Wang D, Arkin AP. Lucks JB, et al. Among authors: mutalik vk. Proc Natl Acad Sci U S A. 2011 May 24;108(21):8617-22. doi: 10.1073/pnas.1015741108. Epub 2011 May 9. Proc Natl Acad Sci U S A. 2011. PMID: 21555549 Free PMC article.

6

Composability of regulatory sequences controlling transcription and translation in Escherichia coli.

Kosuri S, Goodman DB, Cambray G, Mutalik VK, Gao Y, Arkin AP, Endy D, Church GM. Kosuri S, et al. Among authors: mutalik vk. Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):14024-9. doi: 10.1073/pnas.1301301110. Epub 2013 Aug 7. Proc Natl Acad Sci U S A. 2013. PMID: 23924614 Free PMC article.

7

An adaptor from translational to transcriptional control enables predictable assembly of complex regulation.

Liu CC, Qi L, Lucks JB, Segall-Shapiro TH, Wang D, Mutalik VK, Arkin AP. Liu CC, et al. Among authors: mutalik vk. Nat Methods. 2012 Nov;9(11):1088-94. doi: 10.1038/nmeth.2184. Epub 2012 Sep 30. Nat Methods. 2012. PMID: 23023598

8

Rationally designed families of orthogonal RNA regulators of translation.

Mutalik VK, Qi L, Guimaraes JC, Lucks JB, Arkin AP. Mutalik VK, et al. Nat Chem Biol. 2012 Mar 25;8(5):447-54. doi: 10.1038/nchembio.919. Nat Chem Biol. 2012. PMID: 22446835

9

Rapid and Efficient One-Step Metabolic Pathway Integration in E. coli.

Bassalo MC, Garst AD, Halweg-Edwards AL, Grau WC, Domaille DW, Mutalik VK, Arkin AP, Gill RT. Bassalo MC, et al. Among authors: mutalik vk. ACS Synth Biol. 2016 Jul 15;5(7):561-8. doi: 10.1021/acssynbio.5b00187. Epub 2016 Apr 22. ACS Synth Biol. 2016. PMID: 27072506

10

Toward rational design of bacterial genomes.

Cambray G, Mutalik VK, Arkin AP. Cambray G, et al. Among authors: mutalik vk. Curr Opin Microbiol. 2011 Oct;14(5):624-30. doi: 10.1016/j.mib.2011.08.001. Epub 2011 Aug 22. Curr Opin Microbiol. 2011. PMID: 21865081 Review.

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