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The EpiDiverse Plant Epigenome-Wide Association Studies (EWAS) Pipeline.
Can SN, Nunn A, Galanti D, Langenberger D, Becker C, Volmer K, Heer K, Opgenoorth L, Fernandez-Pozo N, Rensing SA. Can SN, et al. Among authors: nunn a. Epigenomes. 2021 May 4;5(2):12. doi: 10.3390/epigenomes5020012. Epigenomes. 2021. PMID: 34968299 Free PMC article.
Chromosome-level Thlaspi arvense genome provides new tools for translational research and for a newly domesticated cash cover crop of the cooler climates.
Nunn A, Rodríguez-Arévalo I, Tandukar Z, Frels K, Contreras-Garrido A, Carbonell-Bejerano P, Zhang P, Ramos Cruz D, Jandrasits K, Lanz C, Brusa A, Mirouze M, Dorn K, Galbraith DW, Jarvis BA, Sedbrook JC, Wyse DL, Otto C, Langenberger D, Stadler PF, Weigel D, Marks MD, Anderson JA, Becker C, Chopra R. Nunn A, et al. Plant Biotechnol J. 2022 May;20(5):944-963. doi: 10.1111/pbi.13775. Epub 2022 Feb 6. Plant Biotechnol J. 2022. PMID: 34990041 Free PMC article.
MethylScore, a pipeline for accurate and context-aware identification of differentially methylated regions from population-scale plant whole-genome bisulfite sequencing data.
Hüther P, Hagmann J, Nunn A, Kakoulidou I, Pisupati R, Langenberger D, Weigel D, Johannes F, Schultheiss SJ, Becker C. Hüther P, et al. Among authors: nunn a. Quant Plant Biol. 2022 Sep 26;3:e19. doi: 10.1017/qpb.2022.14. eCollection 2022. Quant Plant Biol. 2022. PMID: 37077980 Free PMC article.
epiGBS2: Improvements and evaluation of highly multiplexed, epiGBS-based reduced representation bisulfite sequencing.
Gawehns F, Postuma M, van Antro M, Nunn A, Sepers B, Fatma S, van Gurp TP, Wagemaker NCAM, Mateman AC, Milanovic-Ivanovic S, Groβe I, van Oers K, Vergeer P, Verhoeven KJF. Gawehns F, et al. Among authors: nunn a. Mol Ecol Resour. 2022 Jul;22(5):2087-2104. doi: 10.1111/1755-0998.13597. Epub 2022 Mar 3. Mol Ecol Resour. 2022. PMID: 35178872 Free PMC article.
770 results