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Fully integrated silicon probes for high-density recording of neural activity.
Jun JJ, Steinmetz NA, Siegle JH, Denman DJ, Bauza M, Barbarits B, Lee AK, Anastassiou CA, Andrei A, Aydın Ç, Barbic M, Blanche TJ, Bonin V, Couto J, Dutta B, Gratiy SL, Gutnisky DA, Häusser M, Karsh B, Ledochowitsch P, Lopez CM, Mitelut C, Musa S, Okun M, Pachitariu M, Putzeys J, Rich PD, Rossant C, Sun WL, Svoboda K, Carandini M, Harris KD, Koch C, O'Keefe J, Harris TD. Jun JJ, et al. Among authors: pachitariu m. Nature. 2017 Nov 8;551(7679):232-236. doi: 10.1038/nature24636. Nature. 2017. PMID: 29120427 Free PMC article.
Cellpose: a generalist algorithm for cellular segmentation.
Stringer C, Wang T, Michaelos M, Pachitariu M. Stringer C, et al. Among authors: pachitariu m. Nat Methods. 2021 Jan;18(1):100-106. doi: 10.1038/s41592-020-01018-x. Epub 2020 Dec 14. Nat Methods. 2021. PMID: 33318659
Survey of spiking in the mouse visual system reveals functional hierarchy.
Siegle JH, Jia X, Durand S, Gale S, Bennett C, Graddis N, Heller G, Ramirez TK, Choi H, Luviano JA, Groblewski PA, Ahmed R, Arkhipov A, Bernard A, Billeh YN, Brown D, Buice MA, Cain N, Caldejon S, Casal L, Cho A, Chvilicek M, Cox TC, Dai K, Denman DJ, de Vries SEJ, Dietzman R, Esposito L, Farrell C, Feng D, Galbraith J, Garrett M, Gelfand EC, Hancock N, Harris JA, Howard R, Hu B, Hytnen R, Iyer R, Jessett E, Johnson K, Kato I, Kiggins J, Lambert S, Lecoq J, Ledochowitsch P, Lee JH, Leon A, Li Y, Liang E, Long F, Mace K, Melchior J, Millman D, Mollenkopf T, Nayan C, Ng L, Ngo K, Nguyen T, Nicovich PR, North K, Ocker GK, Ollerenshaw D, Oliver M, Pachitariu M, Perkins J, Reding M, Reid D, Robertson M, Ronellenfitch K, Seid S, Slaughterbeck C, Stoecklin M, Sullivan D, Sutton B, Swapp J, Thompson C, Turner K, Wakeman W, Whitesell JD, Williams D, Williford A, Young R, Zeng H, Naylor S, Phillips JW, Reid RC, Mihalas S, Olsen SR, Koch C. Siegle JH, et al. Among authors: pachitariu m. Nature. 2021 Apr;592(7852):86-92. doi: 10.1038/s41586-020-03171-x. Epub 2021 Jan 20. Nature. 2021. PMID: 33473216 Free PMC article.
Neuropixels 2.0: A miniaturized high-density probe for stable, long-term brain recordings.
Steinmetz NA, Aydin C, Lebedeva A, Okun M, Pachitariu M, Bauza M, Beau M, Bhagat J, Böhm C, Broux M, Chen S, Colonell J, Gardner RJ, Karsh B, Kloosterman F, Kostadinov D, Mora-Lopez C, O'Callaghan J, Park J, Putzeys J, Sauerbrei B, van Daal RJJ, Vollan AZ, Wang S, Welkenhuysen M, Ye Z, Dudman JT, Dutta B, Hantman AW, Harris KD, Lee AK, Moser EI, O'Keefe J, Renart A, Svoboda K, Häusser M, Haesler S, Carandini M, Harris TD. Steinmetz NA, et al. Among authors: pachitariu m. Science. 2021 Apr 16;372(6539):eabf4588. doi: 10.1126/science.abf4588. Science. 2021. PMID: 33859006 Free PMC article.
Cellpose 2.0: how to train your own model.
Pachitariu M, Stringer C. Pachitariu M, et al. Nat Methods. 2022 Dec;19(12):1634-1641. doi: 10.1038/s41592-022-01663-4. Epub 2022 Nov 7. Nat Methods. 2022. PMID: 36344832 Free PMC article.
High-dimensional geometry of population responses in visual cortex.
Stringer C, Pachitariu M, Steinmetz N, Carandini M, Harris KD. Stringer C, et al. Among authors: pachitariu m. Nature. 2019 Jul;571(7765):361-365. doi: 10.1038/s41586-019-1346-5. Epub 2019 Jun 26. Nature. 2019. PMID: 31243367 Free PMC article.
Toroidal topology of population activity in grid cells.
Gardner RJ, Hermansen E, Pachitariu M, Burak Y, Baas NA, Dunn BA, Moser MB, Moser EI. Gardner RJ, et al. Among authors: pachitariu m. Nature. 2022 Feb;602(7895):123-128. doi: 10.1038/s41586-021-04268-7. Epub 2022 Jan 12. Nature. 2022. PMID: 35022611 Free PMC article.
25 results