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SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse.
Konings F, Perkins MD, Kuhn JH, Pallen MJ, Alm EJ, Archer BN, Barakat A, Bedford T, Bhiman JN, Caly L, Carter LL, Cullinane A, de Oliveira T, Druce J, El Masry I, Evans R, Gao GF, Gorbalenya AE, Hamblion E, Herring BL, Hodcroft E, Holmes EC, Kakkar M, Khare S, Koopmans MPG, Korber B, Leite J, MacCannell D, Marklewitz M, Maurer-Stroh S, Rico JAM, Munster VJ, Neher R, Munnink BO, Pavlin BI, Peiris M, Poon L, Pybus O, Rambaut A, Resende P, Subissi L, Thiel V, Tong S, van der Werf S, von Gottberg A, Ziebuhr J, Van Kerkhove MD. Konings F, et al. Among authors: pallen mj. Nat Microbiol. 2021 Jul;6(7):821-823. doi: 10.1038/s41564-021-00932-w. Nat Microbiol. 2021. PMID: 34108654 No abstract available.
Replacement of the Alpha variant of SARS-CoV-2 by the Delta variant in Lebanon between April and June 2021.
Merhi G, Trotter AJ, de Oliveira Martins L, Koweyes J, Le-Viet T, Abou Naja H, Al Buaini M, Prosolek SJ, Alikhan NF, Lott M, Tohmeh T, Badran B, Jupp OJ, Gardner S, Felgate MW, Makin KA, Wilkinson JM, Stanley R, Sesay AK, Webber MA, Davidson RK, Ghosn N, Pallen M, Hasan H, Page AJ, Tokajian S. Merhi G, et al. Microb Genom. 2022 Jul;8(7):mgen000838. doi: 10.1099/mgen.0.000838. Microb Genom. 2022. PMID: 35876490 Free PMC article.
The Next Million Names for Archaea and Bacteria.
Pallen MJ, Telatin A, Oren A. Pallen MJ, et al. Trends Microbiol. 2021 Apr;29(4):289-298. doi: 10.1016/j.tim.2020.10.009. Epub 2020 Dec 4. Trends Microbiol. 2021. PMID: 33288384 Free article. Review.
Whole-Genome Sequencing of Brachyspira hyodysenteriae Isolates From England and Wales Reveals Similarities to European Isolates and Mutations Associated With Reduced Sensitivity to Antimicrobials.
Stubberfield E, Sheldon J, Card RM, AbuOun M, Rogers J, Williamson S, Kay GL, Pallen MJ, Anjum MF. Stubberfield E, et al. Among authors: pallen mj. Front Microbiol. 2021 Aug 31;12:713233. doi: 10.3389/fmicb.2021.713233. eCollection 2021. Front Microbiol. 2021. PMID: 34531838 Free PMC article.
Twenty years of bacterial genome sequencing.
Loman NJ, Pallen MJ. Loman NJ, et al. Among authors: pallen mj. Nat Rev Microbiol. 2015 Dec;13(12):787-94. doi: 10.1038/nrmicro3565. Epub 2015 Nov 9. Nat Rev Microbiol. 2015. PMID: 26548914 Review.
The oesophageal microbiome and cancer: hope or hype?
Kumar B, Lam S, Adam M, Gilroy R, Pallen MJ. Kumar B, et al. Among authors: pallen mj. Trends Microbiol. 2022 Apr;30(4):322-329. doi: 10.1016/j.tim.2021.08.007. Epub 2021 Sep 4. Trends Microbiol. 2022. PMID: 34493428 Review.
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