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Cyclosporine a directly affects human and mouse b cell migration in vitro by disrupting a hIF-1 αdependent, o2 sensing, molecular switch.
BMC Immunol. 2020 Mar 18;21(1):13. doi: 10.1186/s12865-020-0342-8.
BMC Immunol. 2020.
PMID: 32183695
Free PMC article.
Cyclosporine A Modulates LSP1 Protein Levels in Human B Cells to Attenuate B Cell Migration at Low O2 Levels.
Hilchey SP, Palshikar MG, Mendelson ES, Shen S, Rasam S, Emo JA, Qu J, Thakar J, Zand MS.
Hilchey SP, et al. Among authors: palshikar mg.
Life (Basel). 2022 Aug 22;12(8):1284. doi: 10.3390/life12081284.
Life (Basel). 2022.
PMID: 36013463
Free PMC article.
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Executable pathway analysis using ensemble discrete-state modeling for large-scale data.
Palli R, Palshikar MG, Thakar J.
Palli R, et al. Among authors: palshikar mg.
PLoS Comput Biol. 2019 Sep 3;15(9):e1007317. doi: 10.1371/journal.pcbi.1007317. eCollection 2019 Sep.
PLoS Comput Biol. 2019.
PMID: 31479446
Free PMC article.
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WikiNetworks: translating manually created biological pathways for topological analysis.
Palshikar MG, Hilchey SP, Zand MS, Thakar J.
Palshikar MG, et al.
Bioinformatics. 2022 Jan 12;38(3):869-871. doi: 10.1093/bioinformatics/btab699.
Bioinformatics. 2022.
PMID: 34636843
Free PMC article.
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Executable models of immune signaling pathways in HIV-associated atherosclerosis.
Palshikar MG, Palli R, Tyrell A, Maggirwar S, Schifitto G, Singh MV, Thakar J.
Palshikar MG, et al.
NPJ Syst Biol Appl. 2022 Sep 21;8(1):35. doi: 10.1038/s41540-022-00246-5.
NPJ Syst Biol Appl. 2022.
PMID: 36131068
Free PMC article.
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Discrete-state models identify pathway specific B cell states across diseases and infections at single-cell resolution.
Kassis G, Palshikar MG, Hilchey SP, Zand MS, Thakar J.
Kassis G, et al. Among authors: palshikar mg.
J Theor Biol. 2024 Apr 21;583:111769. doi: 10.1016/j.jtbi.2024.111769. Epub 2024 Feb 28.
J Theor Biol. 2024.
PMID: 38423206
Free PMC article.
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Executable Network Models of Integrated Multiomics Data.
Palshikar MG, Min X, Crystal A, Meng J, Hilchey SP, Zand MS, Thakar J.
Palshikar MG, et al.
J Proteome Res. 2023 May 5;22(5):1546-1556. doi: 10.1021/acs.jproteome.2c00730. Epub 2023 Mar 31.
J Proteome Res. 2023.
PMID: 37000949
Free PMC article.
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