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Unraveling genomic variation from next generation sequencing data.
Pavlopoulos GA, Oulas A, Iacucci E, Sifrim A, Moreau Y, Schneider R, Aerts J, Iliopoulos I. Pavlopoulos GA, et al. BioData Min. 2013 Jul 25;6(1):13. doi: 10.1186/1756-0381-6-13. BioData Min. 2013. PMID: 23885890 Free PMC article.
GIBA: a clustering tool for detecting protein complexes.
Moschopoulos CN, Pavlopoulos GA, Schneider R, Likothanassis SD, Kossida S. Moschopoulos CN, et al. Among authors: pavlopoulos ga. BMC Bioinformatics. 2009 Jun 16;10 Suppl 6(Suppl 6):S11. doi: 10.1186/1471-2105-10-S6-S11. BMC Bioinformatics. 2009. PMID: 19534736 Free PMC article.
A reference guide for tree analysis and visualization.
Pavlopoulos GA, Soldatos TG, Barbosa-Silva A, Schneider R. Pavlopoulos GA, et al. BioData Min. 2010 Feb 22;3(1):1. doi: 10.1186/1756-0381-3-1. BioData Min. 2010. PMID: 20175922 Free PMC article.
Using graph theory to analyze biological networks.
Pavlopoulos GA, Secrier M, Moschopoulos CN, Soldatos TG, Kossida S, Aerts J, Schneider R, Bagos PG. Pavlopoulos GA, et al. BioData Min. 2011 Apr 28;4:10. doi: 10.1186/1756-0381-4-10. BioData Min. 2011. PMID: 21527005 Free PMC article.
Which clustering algorithm is better for predicting protein complexes?
Moschopoulos CN, Pavlopoulos GA, Iacucci E, Aerts J, Likothanassis S, Schneider R, Kossida S. Moschopoulos CN, et al. Among authors: pavlopoulos ga. BMC Res Notes. 2011 Dec 20;4:549. doi: 10.1186/1756-0500-4-549. BMC Res Notes. 2011. PMID: 22185599 Free PMC article.
Caipirini: using gene sets to rank literature.
Soldatos TG, O'Donoghue SI, Satagopam VP, Barbosa-Silva A, Pavlopoulos GA, Wanderley-Nogueira AC, Soares-Cavalcanti NM, Schneider R. Soldatos TG, et al. Among authors: pavlopoulos ga. BioData Min. 2012 Feb 1;5(1):1. doi: 10.1186/1756-0381-5-1. BioData Min. 2012. PMID: 22297131 Free PMC article.
74 results