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Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.
Jiao WB, Accinelli GG, Hartwig B, Kiefer C, Baker D, Severing E, Willing EM, Piednoel M, Woetzel S, Madrid-Herrero E, Huettel B, Hümann U, Reinhard R, Koch MA, Swan D, Clavijo B, Coupland G, Schneeberger K. Jiao WB, et al. Among authors: piednoel m. Genome Res. 2017 May;27(5):778-786. doi: 10.1101/gr.213652.116. Epub 2017 Feb 3. Genome Res. 2017. PMID: 28159771 Free PMC article.
Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.
Willing EM, Rawat V, Mandáková T, Maumus F, James GV, Nordström KJ, Becker C, Warthmann N, Chica C, Szarzynska B, Zytnicki M, Albani MC, Kiefer C, Bergonzi S, Castaings L, Mateos JL, Berns MC, Bujdoso N, Piofczyk T, de Lorenzo L, Barrero-Sicilia C, Mateos I, Piednoël M, Hagmann J, Chen-Min-Tao R, Iglesias-Fernández R, Schuster SC, Alonso-Blanco C, Roudier F, Carbonero P, Paz-Ares J, Davis SJ, Pecinka A, Quesneville H, Colot V, Lysak MA, Weigel D, Coupland G, Schneeberger K. Willing EM, et al. Among authors: piednoel m. Nat Plants. 2015 Feb 2;1:14023. doi: 10.1038/nplants.2014.23. Nat Plants. 2015. PMID: 27246759
The Physcomitrella patens chromosome-scale assembly reveals moss genome structure and evolution.
Lang D, Ullrich KK, Murat F, Fuchs J, Jenkins J, Haas FB, Piednoel M, Gundlach H, Van Bel M, Meyberg R, Vives C, Morata J, Symeonidi A, Hiss M, Muchero W, Kamisugi Y, Saleh O, Blanc G, Decker EL, van Gessel N, Grimwood J, Hayes RD, Graham SW, Gunter LE, McDaniel SF, Hoernstein SNW, Larsson A, Li FW, Perroud PF, Phillips J, Ranjan P, Rokshar DS, Rothfels CJ, Schneider L, Shu S, Stevenson DW, Thümmler F, Tillich M, Villarreal Aguilar JC, Widiez T, Wong GK, Wymore A, Zhang Y, Zimmer AD, Quatrano RS, Mayer KFX, Goodstein D, Casacuberta JM, Vandepoele K, Reski R, Cuming AC, Tuskan GA, Maumus F, Salse J, Schmutz J, Rensing SA. Lang D, et al. Among authors: piednoel m. Plant J. 2018 Feb;93(3):515-533. doi: 10.1111/tpj.13801. Plant J. 2018. PMID: 29237241 Free article.
Eukaryote DIRS1-like retrotransposons: an overview.
Piednoël M, Gonçalves IR, Higuet D, Bonnivard E. Piednoël M, et al. BMC Genomics. 2011 Dec 20;12:621. doi: 10.1186/1471-2164-12-621. BMC Genomics. 2011. PMID: 22185659 Free PMC article. Review.
16 results