Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2000 1
2002 1
2008 1
2009 1
2010 2
2011 1
2012 1
2014 1
2015 1
2018 1
2019 2
2021 1
2022 3
2023 2

Text availability

Article attribute

Article type

Publication date

Search Results

19 results

Results by year

Filters applied: . Clear all
Page 1
Viruses of haloarchaea.
Luk AW, Williams TJ, Erdmann S, Papke RT, Cavicchioli R. Luk AW, et al. Life (Basel). 2014 Nov 13;4(4):681-715. doi: 10.3390/life4040681. Life (Basel). 2014. PMID: 25402735 Free PMC article. Review.
In hypersaline environments, haloarchaea (halophilic members of the Archaea) are the dominant organisms, and the viruses that infect them, haloarchaeoviruses are at least ten times more abundant. Since their discovery in 1974, described haloarchaeoviruses include head-tail …
In hypersaline environments, haloarchaea (halophilic members of the Archaea) are the dominant organisms, and the viruses that infect …
Viruses and Their Interactions With Bacteria and Archaea of Hypersaline Great Salt Lake.
Bhattarai B, Bhattacharjee AS, Coutinho FH, Goel RK. Bhattarai B, et al. Front Microbiol. 2021 Sep 28;12:701414. doi: 10.3389/fmicb.2021.701414. eCollection 2021. Front Microbiol. 2021. PMID: 34650523 Free PMC article.
The GSL sediment virosphere consisted of Haloviruses (32.07 19.33%) and members of families Siphoviridae (39.12 19.8%), Myoviridae (13.7 6.6%), and Podoviridae (5.43 0.64%). Our results demonstrate that salinity alongside the concentration of organic carbon and inorganic n …
The GSL sediment virosphere consisted of Haloviruses (32.07 19.33%) and members of families Siphoviridae (39.12 19.8%), Myoviridae (13.7 6.6 …
The interaction of four-way DNA junctions with resolving enzymes.
Lilley DM. Lilley DM. Biochem Soc Trans. 2010 Apr;38(2):399-403. doi: 10.1042/BST0380399. Biochem Soc Trans. 2010. PMID: 20298191 Review.
Four-way DNA (Holliday) junctions are resolved into duplex species by the action of the junction-resolving enzymes, nucleases selective for the structure of helical branchpoints. These have been isolated from bacteria and their phages, archaea, yeasts and mammals, includin …
Four-way DNA (Holliday) junctions are resolved into duplex species by the action of the junction-resolving enzymes, nucleases selective for …
Insights into the human gut virome by sampling a population from the Indian subcontinent.
Bhardwaj K, Garg A, Pandey AD, Sharma H, Kumar M, Vrati S. Bhardwaj K, et al. J Gen Virol. 2022 Aug;103(8). doi: 10.1099/jgv.0.001774. J Gen Virol. 2022. PMID: 35951476
Analysis shows that, similar to the populations investigated earlier, majority of the identified virome belongs to bacteriophages and a smaller fraction (<20 %) consists of viruses that infect animals, archaea, protists, multiple domains or plants. However, crAss-like p …
Analysis shows that, similar to the populations investigated earlier, majority of the identified virome belongs to bacteriophages and a smal …
Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy.
Aiewsakun P, Adriaenssens EM, Lavigne R, Kropinski AM, Simmonds P. Aiewsakun P, et al. J Gen Virol. 2018 Sep;99(9):1331-1343. doi: 10.1099/jgv.0.001110. Epub 2018 Jul 17. J Gen Virol. 2018. PMID: 30016225 Free PMC article.
In the current study, a parallel analysis of prokaryotic virus families revealed quite different sequence relationships, particularly those of tailed phage families (Siphoviridae, Myoviridae and Podoviridae), where members of the same family were generally far more diverge …
In the current study, a parallel analysis of prokaryotic virus families revealed quite different sequence relationships, particularly those …
The microbiome and its association with antibiotic resistance genes in the hadal biosphere at the Yap Trench.
Su H, Wu C, Han P, Liu Z, Liang M, Zhang Z, Wang Z, Guo G, He X, Pang J, Wang C, Weng S, He J. Su H, et al. J Hazard Mater. 2022 Oct 5;439:129543. doi: 10.1016/j.jhazmat.2022.129543. Epub 2022 Jul 6. J Hazard Mater. 2022. PMID: 35870206
Here, we profiled the microbiome diversity and ARG occurrence in seawater and sediments of the Yap Trench (YT) using metagenomic sequencing. Within the prokaryote (bacteria and archaea) lineages, the main components of bacteria were Gammaproteobacteria (77.76 %), Firmicute …
Here, we profiled the microbiome diversity and ARG occurrence in seawater and sediments of the Yap Trench (YT) using metagenomic sequencing. …
Estimate of the diversity of viral and bacterial assemblage in the coastal water of Lake Baikal.
Butina TV, Bukin YS, Krasnopeev AS, Belykh OI, Tupikin AE, Kabilov MR, Sakirko МV, Belikov SI. Butina TV, et al. FEMS Microbiol Lett. 2019 May 1;366(9):fnz094. doi: 10.1093/femsle/fnz094. FEMS Microbiol Lett. 2019. PMID: 31049590
Out of 1 030 169 processed virome reads, 37.4% of sequences (385 421) were identified as viral; 15.1% were identified as nonviral and related to the domains Eukarya, Bacteria and Archaea; and 47.5% had no matches in the databases. The identified virotypes belonged to diffe …
Out of 1 030 169 processed virome reads, 37.4% of sequences (385 421) were identified as viral; 15.1% were identified as nonviral and relate …
Structural and functional characteristics of soil microbial community in a Pinus massoniana forest at different elevations.
Zhang J, Xu M, Zou X, Chen J. Zhang J, et al. PeerJ. 2022 Jul 15;10:e13504. doi: 10.7717/peerj.13504. eCollection 2022. PeerJ. 2022. PMID: 35860041 Free PMC article.
We observed that the richness of bacteria, fungi, and viruses in the soil microbial community changed in a unimodal pattern with increasing elevation while that of Archaea first increased significantly, then decreased, and finally increased again. Euryarchaeota and Thaumar …
We observed that the richness of bacteria, fungi, and viruses in the soil microbial community changed in a unimodal pattern with increasing …
Nonbacterial Microflora in Wastewater Treatment Plants: an Underappreciated Potential Source of Pathogens.
Ariyadasa S, Taylor W, Weaver L, McGill E, Billington C, Pattis I. Ariyadasa S, et al. Microbiol Spectr. 2023 May 24:e0048123. doi: 10.1128/spectrum.00481-23. Online ahead of print. Microbiol Spectr. 2023. PMID: 37222623 Free article.
Our results suggest a similar trend across many taxa, with an increase in relative abundance in oxidation pond samples compared to influent and effluent samples, except for archaea, which had the opposite trend. Additionally, some microbial families, such as Podoviridae …
Our results suggest a similar trend across many taxa, with an increase in relative abundance in oxidation pond samples compared to influent …
Natural tuning of restriction endonuclease synthesis by cluster of rare arginine codons.
Mruk I, Kaczorowski T, Witczak A. Mruk I, et al. Sci Rep. 2019 Apr 9;9(1):5808. doi: 10.1038/s41598-019-42311-w. Sci Rep. 2019. PMID: 30967604 Free PMC article.
Restriction-modification (R-M) systems are highly widespread among bacteria and archaea, and they appear to play a pivotal role in modulating horizontal gene transfer, as well as in protecting the host organism against viruses and other invasive DNA particles. ...
Restriction-modification (R-M) systems are highly widespread among bacteria and archaea, and they appear to play a pivotal role in mo …
19 results