Pomraning KR - Search Results

1

Library preparation and data analysis packages for rapid genome sequencing.

Pomraning KR, Smith KM, Bredeweg EL, Connolly LR, Phatale PA, Freitag M. Pomraning KR, et al. Methods Mol Biol. 2012;944:1-22. doi: 10.1007/978-1-62703-122-6_1. Methods Mol Biol. 2012. PMID: 23065605 Free PMC article.

2

Genome-wide high throughput analysis of DNA methylation in eukaryotes.

Pomraning KR, Smith KM, Freitag M. Pomraning KR, et al. Methods. 2009 Mar;47(3):142-50. doi: 10.1016/j.ymeth.2008.09.022. Epub 2008 Oct 23. Methods. 2009. PMID: 18950712

3

Heterochromatin is required for normal distribution of Neurospora crassa CenH3.

Smith KM, Phatale PA, Sullivan CM, Pomraning KR, Freitag M. Smith KM, et al. Among authors: pomraning kr. Mol Cell Biol. 2011 Jun;31(12):2528-42. doi: 10.1128/MCB.01285-10. Epub 2011 Apr 19. Mol Cell Biol. 2011. PMID: 21505064 Free PMC article.

4

Bulk segregant analysis followed by high-throughput sequencing reveals the Neurospora cell cycle gene, ndc-1, to be allelic with the gene for ornithine decarboxylase, spe-1.

Pomraning KR, Smith KM, Freitag M. Pomraning KR, et al. Eukaryot Cell. 2011 Jun;10(6):724-33. doi: 10.1128/EC.00016-11. Epub 2011 Apr 22. Eukaryot Cell. 2011. PMID: 21515825 Free PMC article.

5

Dynamic DNA cytosine methylation in the Populus trichocarpa genome: tissue-level variation and relationship to gene expression.

Vining KJ, Pomraning KR, Wilhelm LJ, Priest HD, Pellegrini M, Mockler TC, Freitag M, Strauss SH. Vining KJ, et al. Among authors: pomraning kr. BMC Genomics. 2012 Jan 17;13:27. doi: 10.1186/1471-2164-13-27. BMC Genomics. 2012. PMID: 22251412 Free PMC article.

6

Genome resequencing reveals multiscale geographic structure and extensive linkage disequilibrium in the forest tree Populus trichocarpa.

Slavov GT, DiFazio SP, Martin J, Schackwitz W, Muchero W, Rodgers-Melnick E, Lipphardt MF, Pennacchio CP, Hellsten U, Pennacchio LA, Gunter LE, Ranjan P, Vining K, Pomraning KR, Wilhelm LJ, Pellegrini M, Mockler TC, Freitag M, Geraldes A, El-Kassaby YA, Mansfield SD, Cronk QCB, Douglas CJ, Strauss SH, Rokhsar D, Tuskan GA. Slavov GT, et al. Among authors: pomraning kr. New Phytol. 2012 Nov;196(3):713-725. doi: 10.1111/j.1469-8137.2012.04258.x. Epub 2012 Aug 3. New Phytol. 2012. PMID: 22861491 Free article.

7

Bacterial resistance to antisense peptide phosphorodiamidate morpholino oligomers.

Puckett SE, Reese KA, Mitev GM, Mullen V, Johnson RC, Pomraning KR, Mellbye BL, Tilley LD, Iversen PL, Freitag M, Geller BL. Puckett SE, et al. Among authors: pomraning kr. Antimicrob Agents Chemother. 2012 Dec;56(12):6147-53. doi: 10.1128/AAC.00850-12. Epub 2012 Sep 17. Antimicrob Agents Chemother. 2012. PMID: 22985881 Free PMC article.

8

Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa.

Vining K, Pomraning KR, Wilhelm LJ, Ma C, Pellegrini M, Di Y, Mockler TC, Freitag M, Strauss SH. Vining K, et al. Among authors: pomraning kr. BMC Plant Biol. 2013 Jun 25;13:92. doi: 10.1186/1471-2229-13-92. BMC Plant Biol. 2013. PMID: 23799904 Free PMC article.

9

Increase in cellular triacylglycerol content and emergence of large ER-associated lipid droplets in the absence of CDP-DG synthase function.

He Y, Yam C, Pomraning K, Chin JS, Yew JY, Freitag M, Oliferenko S. He Y, et al. Mol Biol Cell. 2014 Dec 15;25(25):4083-95. doi: 10.1091/mbc.E14-03-0832. Epub 2014 Oct 15. Mol Biol Cell. 2014. PMID: 25318672 Free PMC article.

10

Comprehensive Metabolomic, Lipidomic and Microscopic Profiling of Yarrowia lipolytica during Lipid Accumulation Identifies Targets for Increased Lipogenesis.

Pomraning KR, Wei S, Karagiosis SA, Kim YM, Dohnalkova AC, Arey BW, Bredeweg EL, Orr G, Metz TO, Baker SE. Pomraning KR, et al. PLoS One. 2015 Apr 23;10(4):e0123188. doi: 10.1371/journal.pone.0123188. eCollection 2015. PLoS One. 2015. PMID: 25905710 Free PMC article.

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