Rübel O - Search Results

1

Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data.

Rübel O, Ahern S, Bethel EW, Biggin MD, Childs H, Cormier-Michel E, Depace A, Eisen MB, Fowlkes CC, Geddes CG, Hagen H, Hamann B, Huang MY, Keränen SV, Knowles DW, Hendriks CL, Malik J, Meredith J, Messmer P, Prabhat, Ushizima D, Weber GH, Wu K. Rübel O, et al. Procedia Comput Sci. 2010 May;1(1):1757-1764. doi: 10.1016/j.procs.2010.04.197. Procedia Comput Sci. 2010. PMID: 23762211 Free PMC article.

2

Visual exploration of three-dimensional gene expression using physical views and linked abstract views.

Weber GH, Rübel O, Huang MY, DePace AH, Fowlkes CC, Keränen SV, Luengo Hendriks CL, Hagen H, Knowles DW, Malik J, Biggin MD, Hamann B. Weber GH, et al. Among authors: rubel o. IEEE/ACM Trans Comput Biol Bioinform. 2009 Apr-Jun;6(2):296-309. doi: 10.1109/TCBB.2007.70249. IEEE/ACM Trans Comput Biol Bioinform. 2009. PMID: 19407353 Free PMC article.

3

Integrating data clustering and visualization for the analysis of 3D gene expression data.

Rübel O, Weber GH, Huang MY, Bethel EW, Biggin MD, Fowlkes CC, Luengo Hendriks CL, Keränen SV, Eisen MB, Knowles DW, Malik J, Hagen H, Hamann B. Rübel O, et al. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jan-Mar;7(1):64-79. doi: 10.1109/TCBB.2008.49. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 20150669

4

Feature-based analysis of plasma-based particle acceleration data.

Rübel O, Geddes CG, Chen M, Cormier-Michel E, Bethel EW. Rübel O, et al. IEEE Trans Vis Comput Graph. 2014 Feb;20(2):196-210. doi: 10.1109/TVCG.2013.107. IEEE Trans Vis Comput Graph. 2014. PMID: 24356363

5

A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm.

Fowlkes CC, Hendriks CL, Keränen SV, Weber GH, Rübel O, Huang MY, Chatoor S, DePace AH, Simirenko L, Henriquez C, Beaton A, Weiszmann R, Celniker S, Hamann B, Knowles DW, Biggin MD, Eisen MB, Malik J. Fowlkes CC, et al. Among authors: rubel o. Cell. 2008 Apr 18;133(2):364-74. doi: 10.1016/j.cell.2008.01.053. Cell. 2008. PMID: 18423206 Free article.

6

OpenMSI: a high-performance web-based platform for mass spectrometry imaging.

Rübel O, Greiner A, Cholia S, Louie K, Bethel EW, Northen TR, Bowen BP. Rübel O, et al. Anal Chem. 2013 Nov 5;85(21):10354-61. doi: 10.1021/ac402540a. Epub 2013 Oct 25. Anal Chem. 2013. PMID: 24087878

7

Methods for Specifying Scientific Data Standards and Modeling Relationships with Applications to Neuroscience.

Rübel O, Dougherty M, Prabhat, Denes P, Conant D, Chang EF, Bouchard K. Rübel O, et al. Front Neuroinform. 2016 Nov 4;10:48. doi: 10.3389/fninf.2016.00048. eCollection 2016. Front Neuroinform. 2016. PMID: 27867355 Free PMC article.

8

Identifying important ions and positions in mass spectrometry imaging data using CUR matrix decompositions.

Yang J, Rübel O, Prabhat, Mahoney MW, Bowen BP. Yang J, et al. Among authors: rubel o. Anal Chem. 2015;87(9):4658-66. doi: 10.1021/ac5040264. Epub 2015 Apr 13. Anal Chem. 2015. PMID: 25825055

9

WarpIV: In Situ Visualization and Analysis of Ion Accelerator Simulations.

Rubel O, Loring B, Vay JL, Grote DP, Lehe R, Bulanov S, Vincenti H, Bethel EW. Rubel O, et al. IEEE Comput Graph Appl. 2016 May-Jun;36(3):22-35. doi: 10.1109/MCG.2016.62. IEEE Comput Graph Appl. 2016. PMID: 28113157

10

Optimization and Augmentation for Data Parallel Contour Trees.

Carr HA, Rubel O, Weber GH, Ahrens JP. Carr HA, et al. Among authors: rubel o. IEEE Trans Vis Comput Graph. 2022 Oct;28(10):3471-3485. doi: 10.1109/TVCG.2021.3064385. Epub 2022 Sep 1. IEEE Trans Vis Comput Graph. 2022. PMID: 33684039

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