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Compressing genomic sequence fragments using SlimGene.
Kozanitis C, Saunders C, Kruglyak S, Bafna V, Varghese G. Kozanitis C, et al. J Comput Biol. 2011 Mar;18(3):401-13. doi: 10.1089/cmb.2010.0253. J Comput Biol. 2011. PMID: 21385043 Free PMC article.
Strobe sequence design for haplotype assembly.
Lo C, Bashir A, Bansal V, Bafna V. Lo C, et al. BMC Bioinformatics. 2011 Feb 15;12 Suppl 1(Suppl 1):S24. doi: 10.1186/1471-2105-12-S1-S24. BMC Bioinformatics. 2011. PMID: 21342554 Free PMC article.
Experimental selection of hypoxia-tolerant Drosophila melanogaster.
Zhou D, Udpa N, Gersten M, Visk DW, Bashir A, Xue J, Frazer KA, Posakony JW, Subramaniam S, Bafna V, Haddad GG. Zhou D, et al. Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2349-54. doi: 10.1073/pnas.1010643108. Epub 2011 Jan 24. Proc Natl Acad Sci U S A. 2011. PMID: 21262834 Free PMC article.