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Recent improvements in prediction of protein structure by global optimization of a potential energy function.
Pillardy J, Czaplewski C, Liwo A, Lee J, Ripoll DR, Kaźmierkiewicz R, Oldziej S, Wedemeyer WJ, Gibson KD, Arnautova YA, Saunders J, Ye YJ, Scheraga HA. Pillardy J, et al. Among authors: ripoll dr. Proc Natl Acad Sci U S A. 2001 Feb 27;98(5):2329-33. doi: 10.1073/pnas.041609598. Epub 2001 Feb 20. Proc Natl Acad Sci U S A. 2001. PMID: 11226239 Free PMC article.
Physics-based protein-structure prediction using a hierarchical protocol based on the UNRES force field: assessment in two blind tests.
Ołdziej S, Czaplewski C, Liwo A, Chinchio M, Nanias M, Vila JA, Khalili M, Arnautova YA, Jagielska A, Makowski M, Schafroth HD, Kaźmierkiewicz R, Ripoll DR, Pillardy J, Saunders JA, Kang YK, Gibson KD, Scheraga HA. Ołdziej S, et al. Among authors: ripoll dr. Proc Natl Acad Sci U S A. 2005 May 24;102(21):7547-52. doi: 10.1073/pnas.0502655102. Epub 2005 May 13. Proc Natl Acad Sci U S A. 2005. PMID: 15894609 Free PMC article.
On the orientation of the backbone dipoles in native folds.
Ripoll DR, Vila JA, Scheraga HA. Ripoll DR, et al. Proc Natl Acad Sci U S A. 2005 May 24;102(21):7559-64. doi: 10.1073/pnas.0502754102. Epub 2005 May 13. Proc Natl Acad Sci U S A. 2005. PMID: 15894608 Free PMC article.
83 results