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Long non-coding RNAs as a source of new peptides.
Ruiz-Orera J, Messeguer X, Subirana JA, Alba MM. Ruiz-Orera J, et al. Elife. 2014 Sep 16;3:e03523. doi: 10.7554/eLife.03523. Elife. 2014. PMID: 25233276 Free PMC article.
Origins of De Novo Genes in Human and Chimpanzee.
Ruiz-Orera J, Hernandez-Rodriguez J, Chiva C, Sabidó E, Kondova I, Bontrop R, Marqués-Bonet T, Albà MM. Ruiz-Orera J, et al. PLoS Genet. 2015 Dec 31;11(12):e1005721. doi: 10.1371/journal.pgen.1005721. eCollection 2015 Dec. PLoS Genet. 2015. PMID: 26720152 Free PMC article.
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx.
Abascal F, Corvelo A, Cruz F, Villanueva-Cañas JL, Vlasova A, Marcet-Houben M, Martínez-Cruz B, Cheng JY, Prieto P, Quesada V, Quilez J, Li G, García F, Rubio-Camarillo M, Frias L, Ribeca P, Capella-Gutiérrez S, Rodríguez JM, Câmara F, Lowy E, Cozzuto L, Erb I, Tress ML, Rodriguez-Ales JL, Ruiz-Orera J, Reverter F, Casas-Marce M, Soriano L, Arango JR, Derdak S, Galán B, Blanc J, Gut M, Lorente-Galdos B, Andrés-Nieto M, López-Otín C, Valencia A, Gut I, García JL, Guigó R, Murphy WJ, Ruiz-Herrera A, Marques-Bonet T, Roma G, Notredame C, Mailund T, Albà MM, Gabaldón T, Alioto T, Godoy JA. Abascal F, et al. Genome Biol. 2016 Dec 14;17(1):251. doi: 10.1186/s13059-016-1090-1. Genome Biol. 2016. PMID: 27964752 Free PMC article.
New Genes and Functional Innovation in Mammals.
Villanueva-Cañas JL, Ruiz-Orera J, Agea MI, Gallo M, Andreu D, Albà MM. Villanueva-Cañas JL, et al. Genome Biol Evol. 2017 Jul 1;9(7):1886-1900. doi: 10.1093/gbe/evx136. Genome Biol Evol. 2017. PMID: 28854603 Free PMC article.
Uncovering de novo gene birth in yeast using deep transcriptomics.
Blevins WR, Ruiz-Orera J, Messeguer X, Blasco-Moreno B, Villanueva-Cañas JL, Espinar L, Díez J, Carey LB, Albà MM. Blevins WR, et al. Nat Commun. 2021 Jan 27;12(1):604. doi: 10.1038/s41467-021-20911-3. Nat Commun. 2021. PMID: 33504782 Free PMC article.
28 results