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CoMet--a web server for comparative functional profiling of metagenomes.
Lingner T, Asshauer KP, Schreiber F, Meinicke P. Lingner T, et al. Among authors: schreiber f. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W518-23. doi: 10.1093/nar/gkr388. Epub 2011 May 26. Nucleic Acids Res. 2011. PMID: 21622656 Free PMC article.
Treephyler: fast taxonomic profiling of metagenomes.
Schreiber F, Gumrich P, Daniel R, Meinicke P. Schreiber F, et al. Bioinformatics. 2010 Apr 1;26(7):960-1. doi: 10.1093/bioinformatics/btq070. Epub 2010 Feb 19. Bioinformatics. 2010. PMID: 20172941
HMMER web server: 2015 update.
Finn RD, Clements J, Arndt W, Miller BL, Wheeler TJ, Schreiber F, Bateman A, Eddy SR. Finn RD, et al. Among authors: schreiber f. Nucleic Acids Res. 2015 Jul 1;43(W1):W30-8. doi: 10.1093/nar/gkv397. Epub 2015 May 5. Nucleic Acids Res. 2015. PMID: 25943547 Free PMC article.
HIV classification using the coalescent theory.
Bulla I, Schultz AK, Schreiber F, Zhang M, Leitner T, Korber B, Morgenstern B, Stanke M. Bulla I, et al. Among authors: schreiber f. Bioinformatics. 2010 Jun 1;26(11):1409-15. doi: 10.1093/bioinformatics/btq159. Epub 2010 Apr 16. Bioinformatics. 2010. PMID: 20400454 Free PMC article.
Phylogenomics revives traditional views on deep animal relationships.
Philippe H, Derelle R, Lopez P, Pick K, Borchiellini C, Boury-Esnault N, Vacelet J, Renard E, Houliston E, Quéinnec E, Da Silva C, Wincker P, Le Guyader H, Leys S, Jackson DJ, Schreiber F, Erpenbeck D, Morgenstern B, Wörheide G, Manuel M. Philippe H, et al. Among authors: schreiber f. Curr Biol. 2009 Apr 28;19(8):706-12. doi: 10.1016/j.cub.2009.02.052. Epub 2009 Apr 2. Curr Biol. 2009. PMID: 19345102 Free article.
Deep metazoan phylogeny: when different genes tell different stories.
Nosenko T, Schreiber F, Adamska M, Adamski M, Eitel M, Hammel J, Maldonado M, Müller WE, Nickel M, Schierwater B, Vacelet J, Wiens M, Wörheide G. Nosenko T, et al. Among authors: schreiber f. Mol Phylogenet Evol. 2013 Apr;67(1):223-33. doi: 10.1016/j.ympev.2013.01.010. Epub 2013 Jan 23. Mol Phylogenet Evol. 2013. PMID: 23353073
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships.
Pick KS, Philippe H, Schreiber F, Erpenbeck D, Jackson DJ, Wrede P, Wiens M, Alié A, Morgenstern B, Manuel M, Wörheide G. Pick KS, et al. Among authors: schreiber f. Mol Biol Evol. 2010 Sep;27(9):1983-7. doi: 10.1093/molbev/msq089. Epub 2010 Apr 8. Mol Biol Evol. 2010. PMID: 20378579 Free PMC article.
TreeFam v9: a new website, more species and orthology-on-the-fly.
Schreiber F, Patricio M, Muffato M, Pignatelli M, Bateman A. Schreiber F, et al. Nucleic Acids Res. 2014 Jan;42(Database issue):D922-5. doi: 10.1093/nar/gkt1055. Epub 2013 Nov 4. Nucleic Acids Res. 2014. PMID: 24194607 Free PMC article.
581 results