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Showing results for silene dissect
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Species delimitation without prior knowledge: DISSECT reveals extensive cryptic speciation in the Silene aegyptiaca complex (Caryophyllaceae).
Toprak Z, Pfeil BE, Jones G, Marcussen T, Ertekin AS, Oxelman B. Toprak Z, et al. Mol Phylogenet Evol. 2016 Sep;102:1-8. doi: 10.1016/j.ympev.2016.05.024. Epub 2016 May 24. Mol Phylogenet Evol. 2016. PMID: 27233442
Using the DISSECT approach, we analysed genetic data from 75 individual plants belonging to the Silene aegyptiaca species complex that has previously been divided into 3-5 species. Marginal likelihood estimates from (*)BEAST analyses, run with predefined species cla …
Using the DISSECT approach, we analysed genetic data from 75 individual plants belonging to the Silene aegyptiaca species comp …
Genetic architecture of isolation between two species of Silene with sex chromosomes and Haldane's rule.
Demuth JP, Flanagan RJ, Delph LF. Demuth JP, et al. Evolution. 2014 Feb;68(2):332-42. doi: 10.1111/evo.12269. Epub 2013 Sep 30. Evolution. 2014. PMID: 24117135
Examination of the genetic architecture of hybrid breakdown can provide insight into the genetic mechanisms of commonly observed isolating phenomena such as Haldane's rule. We used line-cross analysis to dissect the genetic architecture of divergence between two plant spec …
Examination of the genetic architecture of hybrid breakdown can provide insight into the genetic mechanisms of commonly observed isolating p …
DISSECT: an assignment-free Bayesian discovery method for species delimitation under the multispecies coalescent.
Jones G, Aydin Z, Oxelman B. Jones G, et al. Bioinformatics. 2015 Apr 1;31(7):991-8. doi: 10.1093/bioinformatics/btu770. Epub 2014 Nov 23. Bioinformatics. 2015. PMID: 25422051
None of the available approaches so far have simultaneously co-estimated all the relevant parameters in the model, without restricting the parameter space by requiring a guide tree and/or prior assignment of individuals to clusters or species. RESULTS: We present DISSECT, …
None of the available approaches so far have simultaneously co-estimated all the relevant parameters in the model, without restricting the p …
The role of chromosomal rearrangements in the evolution of Silene latifolia sex chromosomes.
Hobza R, Kejnovsky E, Vyskot B, Widmer A. Hobza R, et al. Mol Genet Genomics. 2007 Dec;278(6):633-8. doi: 10.1007/s00438-007-0279-0. Epub 2007 Aug 2. Mol Genet Genomics. 2007. PMID: 17671795
Silene latifolia is a model plant for studies of the early steps of sex chromosome evolution. ...Here, we combine results from physical mapping of sex-linked genes using polymerase chain reaction on microdissected arms of the S. latifolia X chromosome, and fluorescence in …
Silene latifolia is a model plant for studies of the early steps of sex chromosome evolution. ...Here, we combine results from physic …
FAST-FISH with laser beam microdissected DOP-PCR probe distinguishes the sex chromosomes of Silene latifolia.
Hobza R, Lengerova M, Cernohorska H, Rubes J, Vyskot B. Hobza R, et al. Chromosome Res. 2004;12(3):245-50. doi: 10.1023/b:chro.0000021929.97208.1c. Chromosome Res. 2004. PMID: 15125638
We present an improved FISH strategy for differentiating the sex chromosomes of the dioecious model plant, Silene latifolia. Fixed mitotic protoplasts were dropped on a polyethylene naphthalate membrane, the X or Y chromosomes were isolated using nitrogen laser beam microd …
We present an improved FISH strategy for differentiating the sex chromosomes of the dioecious model plant, Silene latifolia. Fixed mi …
Laser microdissection-based analysis of plant sex chromosomes.
Hobza R, Vyskot B. Hobza R, et al. Methods Cell Biol. 2007;82:433-53. doi: 10.1016/S0091-679X(06)82015-7. Methods Cell Biol. 2007. PMID: 17586267
Here we present a comprehensive protocol to isolate and characterize DNA sequences derived from the sex chromosomes of white campion (Silene latifolia). This dioecious plant has become the most favorite model to study the structure, function, and evolution of plant sex chr …
Here we present a comprehensive protocol to isolate and characterize DNA sequences derived from the sex chromosomes of white campion (Sil …
Asynchrony in individual and subpopulation fecundity stabilizes reproductive output of an alpine plant population.
Waddle E, Piedrahita LR, Hall ES, Kendziorski G, Morris WF, DeMarche ML, Doak DF. Waddle E, et al. Ecology. 2019 Apr;100(4):e02639. doi: 10.1002/ecy.2639. Epub 2019 Mar 11. Ecology. 2019. PMID: 30710357
We used 16 yr of fruit production and climate data for an alpine plant to dissect the scale of portfolio effects in reproduction, as well as the contribution of individual traits including size and flowering time in driving reproductive output. ...
We used 16 yr of fruit production and climate data for an alpine plant to dissect the scale of portfolio effects in reproduction, as …