Spencer FA - Search Results

1

Analysis of genetic interactions on a genome-wide scale in budding yeast: diploid-based synthetic lethality analysis by microarray.

Meluh PB, Pan X, Yuan DS, Tiffany C, Chen O, Sookhai-Mahadeo S, Wang X, Peyser BD, Irizarry R, Spencer FA, Boeke JD. Meluh PB, et al. Among authors: spencer fa. Methods Mol Biol. 2008;416:221-47. doi: 10.1007/978-1-59745-321-9_15. Methods Mol Biol. 2008. PMID: 18392971

2

A robust toolkit for functional profiling of the yeast genome.

Pan X, Yuan DS, Xiang D, Wang X, Sookhai-Mahadeo S, Bader JS, Hieter P, Spencer F, Boeke JD. Pan X, et al. Mol Cell. 2004 Nov 5;16(3):487-96. doi: 10.1016/j.molcel.2004.09.035. Mol Cell. 2004. PMID: 15525520 Free article.

3

Improved microarray methods for profiling the Yeast Knockout strain collection.

Yuan DS, Pan X, Ooi SL, Peyser BD, Spencer FA, Irizarry RA, Boeke JD. Yuan DS, et al. Among authors: spencer fa. Nucleic Acids Res. 2005 Jul 1;33(12):e103. doi: 10.1093/nar/gni105. Nucleic Acids Res. 2005. PMID: 15994458 Free PMC article.

4

Improved statistical analysis of budding yeast TAG microarrays revealed by defined spike-in pools.

Peyser BD, Irizarry RA, Tiffany CW, Chen O, Yuan DS, Boeke JD, Spencer FA. Peyser BD, et al. Among authors: spencer fa. Nucleic Acids Res. 2005 Sep 15;33(16):e140. doi: 10.1093/nar/gni138. Nucleic Acids Res. 2005. PMID: 16166654 Free PMC article.

5

Global synthetic-lethality analysis and yeast functional profiling.

Ooi SL, Pan X, Peyser BD, Ye P, Meluh PB, Yuan DS, Irizarry RA, Bader JS, Spencer FA, Boeke JD. Ooi SL, et al. Among authors: spencer fa. Trends Genet. 2006 Jan;22(1):56-63. doi: 10.1016/j.tig.2005.11.003. Epub 2005 Nov 23. Trends Genet. 2006. PMID: 16309778 Review.

6

Gene function prediction from congruent synthetic lethal interactions in yeast.

Ye P, Peyser BD, Pan X, Boeke JD, Spencer FA, Bader JS. Ye P, et al. Among authors: spencer fa. Mol Syst Biol. 2005;1:2005.0026. doi: 10.1038/msb4100034. Epub 2005 Nov 22. Mol Syst Biol. 2005. PMID: 16729061 Free PMC article.

7

Statistical analysis of fitness data determined by TAG hybridization on microarrays.

Peyser BD, Irizarry R, Spencer FA. Peyser BD, et al. Among authors: spencer fa. Methods Mol Biol. 2008;416:369-81. doi: 10.1007/978-1-59745-321-9_25. Methods Mol Biol. 2008. PMID: 18392981

8

S-phase checkpoint genes safeguard high-fidelity sister chromatid cohesion.

Warren CD, Eckley DM, Lee MS, Hanna JS, Hughes A, Peyser B, Jie C, Irizarry R, Spencer FA. Warren CD, et al. Among authors: spencer fa. Mol Biol Cell. 2004 Apr;15(4):1724-35. doi: 10.1091/mbc.e03-09-0637. Epub 2004 Jan 23. Mol Biol Cell. 2004. PMID: 14742710 Free PMC article.

9

Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast.

Ye P, Peyser BD, Spencer FA, Bader JS. Ye P, et al. Among authors: spencer fa. BMC Bioinformatics. 2005 Nov 9;6:270. doi: 10.1186/1471-2105-6-270. BMC Bioinformatics. 2005. PMID: 16283923 Free PMC article.

10

Multiple-laboratory comparison of microarray platforms.

Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, Gabrielson E, Garcia JG, Geoghegan J, Germino G, Griffin C, Hilmer SC, Hoffman E, Jedlicka AE, Kawasaki E, Martínez-Murillo F, Morsberger L, Lee H, Petersen D, Quackenbush J, Scott A, Wilson M, Yang Y, Ye SQ, Yu W. Irizarry RA, et al. Nat Methods. 2005 May;2(5):345-50. doi: 10.1038/nmeth756. Epub 2005 Apr 21. Nat Methods. 2005. PMID: 15846361 Free article.

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