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Conservation of complex knotting and slipknotting patterns in proteins.
Sułkowska JI, Rawdon EJ, Millett KC, Onuchic JN, Stasiak A. Sułkowska JI, et al. Among authors: stasiak a. Proc Natl Acad Sci U S A. 2012 Jun 26;109(26):E1715-23. doi: 10.1073/pnas.1205918109. Epub 2012 Jun 8. Proc Natl Acad Sci U S A. 2012. PMID: 22685208 Free PMC article.
Identifying knots in proteins.
Millett KC, Rawdon EJ, Stasiak A, Sułkowska JI. Millett KC, et al. Among authors: stasiak a. Biochem Soc Trans. 2013 Apr;41(2):533-7. doi: 10.1042/BST20120339. Biochem Soc Trans. 2013. PMID: 23514149 Review.
Knot localization in proteins.
Rawdon EJ, Millett KC, Sułkowska JI, Stasiak A. Rawdon EJ, et al. Among authors: stasiak a. Biochem Soc Trans. 2013 Apr;41(2):538-41. doi: 10.1042/BST20120329. Biochem Soc Trans. 2013. PMID: 23514150 Review.
KnotProt: a database of proteins with knots and slipknots.
Jamroz M, Niemyska W, Rawdon EJ, Stasiak A, Millett KC, Sułkowski P, Sulkowska JI. Jamroz M, et al. Among authors: stasiak a. Nucleic Acids Res. 2015 Jan;43(Database issue):D306-14. doi: 10.1093/nar/gku1059. Epub 2014 Oct 31. Nucleic Acids Res. 2015. PMID: 25361973 Free PMC article.
In Search of Functional Advantages of Knots in Proteins.
Dabrowski-Tumanski P, Stasiak A, Sulkowska JI. Dabrowski-Tumanski P, et al. Among authors: stasiak a. PLoS One. 2016 Nov 2;11(11):e0165986. doi: 10.1371/journal.pone.0165986. eCollection 2016. PLoS One. 2016. PMID: 27806097 Free PMC article.
KnotProt 2.0: a database of proteins with knots and other entangled structures.
Dabrowski-Tumanski P, Rubach P, Goundaroulis D, Dorier J, Sulkowski P, Millett KC, Rawdon EJ, Stasiak A, Sulkowska JI. Dabrowski-Tumanski P, et al. Among authors: stasiak a. Nucleic Acids Res. 2019 Jan 8;47(D1):D367-D375. doi: 10.1093/nar/gky1140. Nucleic Acids Res. 2019. PMID: 30508159 Free PMC article.
DNA supercoiling inhibits DNA knotting.
Burnier Y, Dorier J, Stasiak A. Burnier Y, et al. Among authors: stasiak a. Nucleic Acids Res. 2008 Sep;36(15):4956-63. doi: 10.1093/nar/gkn467. Epub 2008 Jul 25. Nucleic Acids Res. 2008. PMID: 18658246 Free PMC article.
225 results