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A Multi-Organ Nucleus Segmentation Challenge.
Kumar N, Verma R, Anand D, Zhou Y, Onder OF, Tsougenis E, Chen H, Heng PA, Li J, Hu Z, Wang Y, Koohbanani NA, Jahanifar M, Tajeddin NZ, Gooya A, Rajpoot N, Ren X, Zhou S, Wang Q, Shen D, Yang CK, Weng CH, Yu WH, Yeh CY, Yang S, Xu S, Yeung PH, Sun P, Mahbod A, Schaefer G, Ellinger I, Ecker R, Smedby O, Wang C, Chidester B, Ton TV, Tran MT, Ma J, Do MN, Graham S, Vu QD, Kwak JT, Gunda A, Chunduri R, Hu C, Zhou X, Lotfi D, Safdari R, Kascenas A, O'Neil A, Eschweiler D, Stegmaier J, Cui Y, Yin B, Chen K, Tian X, Gruening P, Barth E, Arbel E, Remer I, Ben-Dor A, Sirazitdinova E, Kohl M, Braunewell S, Li Y, Xie X, Shen L, Ma J, Baksi KD, Khan MA, Choo J, Colomer A, Naranjo V, Pei L, Iftekharuddin KM, Roy K, Bhattacharjee D, Pedraza A, Bueno MG, Devanathan S, Radhakrishnan S, Koduganty P, Wu Z, Cai G, Liu X, Wang Y, Sethi A. Kumar N, et al. Among authors: stegmaier j. IEEE Trans Med Imaging. 2020 May;39(5):1380-1391. doi: 10.1109/TMI.2019.2947628. Epub 2019 Oct 23. IEEE Trans Med Imaging. 2020. PMID: 31647422 Free PMC article.
Using positional information to provide context for biological image analysis with MorphoGraphX 2.0.
Strauss S, Runions A, Lane B, Eschweiler D, Bajpai N, Trozzi N, Routier-Kierzkowska AL, Yoshida S, Rodrigues da Silveira S, Vijayan A, Tofanelli R, Majda M, Echevin E, Le Gloanec C, Bertrand-Rakusova H, Adibi M, Schneitz K, Bassel GW, Kierzkowski D, Stegmaier J, Tsiantis M, Smith RS. Strauss S, et al. Among authors: stegmaier j. Elife. 2022 May 5;11:e72601. doi: 10.7554/eLife.72601. Elife. 2022. PMID: 35510843 Free PMC article.
LiveCellMiner: A new tool to analyze mitotic progression.
Moreno-Andrés D, Bhattacharyya A, Scheufen A, Stegmaier J. Moreno-Andrés D, et al. Among authors: stegmaier j. PLoS One. 2022 Jul 7;17(7):e0270923. doi: 10.1371/journal.pone.0270923. eCollection 2022. PLoS One. 2022. PMID: 35797385 Free PMC article.
XPIWIT--an XML pipeline wrapper for the Insight Toolkit.
Bartschat A, Hübner E, Reischl M, Mikut R, Stegmaier J. Bartschat A, et al. Among authors: stegmaier j. Bioinformatics. 2016 Jan 15;32(2):315-7. doi: 10.1093/bioinformatics/btv559. Epub 2015 Sep 28. Bioinformatics. 2016. PMID: 26415725
66 results