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Functional rare and low frequency variants in BLK and BANK1 contribute to human lupus.
Jiang SH, Athanasopoulos V, Ellyard JI, Chuah A, Cappello J, Cook A, Prabhu SB, Cardenas J, Gu J, Stanley M, Roco JA, Papa I, Yabas M, Walters GD, Burgio G, McKeon K, Byers JM, Burrin C, Enders A, Miosge LA, Canete PF, Jelusic M, Tasic V, Lungu AC, Alexander SI, Kitching AR, Fulcher DA, Shen N, Arsov T, Gatenby PA, Babon JJ, Mallon DF, de Lucas Collantes C, Stone EA, Wu P, Field MA, Andrews TD, Cho E, Pascual V, Cook MC, Vinuesa CG. Jiang SH, et al. Among authors: stone ea. Nat Commun. 2019 May 17;10(1):2201. doi: 10.1038/s41467-019-10242-9. Nat Commun. 2019. PMID: 31101814 Free PMC article.
Long-read sequencing based clinical metagenomics for the detection and confirmation of Pneumocystis jirovecii directly from clinical specimens: A paradigm shift in mycological diagnostics.
Irinyi L, Hu Y, Hoang MTV, Pasic L, Halliday C, Jayawardena M, Basu I, McKinney W, Morris AJ, Rathjen J, Stone E, Chen S, Sorrell TC, Schwessinger B, Meyer W. Irinyi L, et al. Med Mycol. 2020 Jul 1;58(5):650-660. doi: 10.1093/mmy/myz109. Med Mycol. 2020. PMID: 31758176
Physical separation of haplotypes in dikaryons allows benchmarking of phasing accuracy in Nanopore and HiFi assemblies with Hi-C data.
Duan H, Jones AW, Hewitt T, Mackenzie A, Hu Y, Sharp A, Lewis D, Mago R, Upadhyaya NM, Rathjen JP, Stone EA, Schwessinger B, Figueroa M, Dodds PN, Periyannan S, Sperschneider J. Duan H, et al. Among authors: stone ea. Genome Biol. 2022 Mar 25;23(1):84. doi: 10.1186/s13059-022-02658-2. Genome Biol. 2022. PMID: 35337367 Free PMC article.
The stem rust fungus Puccinia graminis f. sp. tritici induces centromeric small RNAs during late infection that are associated with genome-wide DNA methylation.
Sperschneider J, Jones AW, Nasim J, Xu B, Jacques S, Zhong C, Upadhyaya NM, Mago R, Hu Y, Figueroa M, Singh KB, Stone EA, Schwessinger B, Wang MB, Taylor JM, Dodds PN. Sperschneider J, et al. Among authors: stone ea. BMC Biol. 2021 Sep 15;19(1):203. doi: 10.1186/s12915-021-01123-z. BMC Biol. 2021. PMID: 34526021 Free PMC article.
Virulence patterns of oat crown rust in Australia - season 2022.
Henningsen E, Lewis D, Nguyen D, Sperschneider J, Kianian SF, Stone EA, Dodds P, Figueroa M. Henningsen E, et al. Among authors: stone ea. Plant Dis. 2024 Jan 26. doi: 10.1094/PDIS-09-23-1973-SC. Online ahead of print. Plant Dis. 2024. PMID: 38277650
Development of Spatio-Temporal Land Use Regression Models for Fine Particulate Matter and Wood-Burning Tracers in Temuco, Chile.
Quinteros ME, Blazquez C, Ayala S, Kilby D, Cárdenas-R JP, Ossa X, Rosas-Diaz F, Stone EA, Blanco E, Delgado-Saborit JM, Harrison RM, Ruiz-Rudolph P. Quinteros ME, et al. Among authors: stone ea. Environ Sci Technol. 2023 Dec 5;57(48):19473-19486. doi: 10.1021/acs.est.3c00720. Epub 2023 Nov 17. Environ Sci Technol. 2023. PMID: 37976408
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