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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics.
Van Goethem MW, Osborn AR, Bowen BP, Andeer PF, Swenson TL, Clum A, Riley R, He G, Koriabine M, Sandor L, Yan M, Daum CG, Yoshinaga Y, Makhalanyane TP, Garcia-Pichel F, Visel A, Pennacchio LA, O'Malley RC, Northen TR. Van Goethem MW, et al. Among authors: swenson tl. Commun Biol. 2021 Nov 18;4(1):1302. doi: 10.1038/s42003-021-02809-4. Commun Biol. 2021. PMID: 34795375 Free PMC article.
Learning representations of microbe-metabolite interactions.
Morton JT, Aksenov AA, Nothias LF, Foulds JR, Quinn RA, Badri MH, Swenson TL, Van Goethem MW, Northen TR, Vazquez-Baeza Y, Wang M, Bokulich NA, Watters A, Song SJ, Bonneau R, Dorrestein PC, Knight R. Morton JT, et al. Among authors: swenson tl. Nat Methods. 2019 Dec;16(12):1306-1314. doi: 10.1038/s41592-019-0616-3. Epub 2019 Nov 4. Nat Methods. 2019. PMID: 31686038 Free PMC article.
Reply to: Examining microbe-metabolite correlations by linear methods.
Morton JT, McDonald D, Aksenov AA, Nothias LF, Foulds JR, Quinn RA, Badri MH, Swenson TL, Van Goethem MW, Northen TR, Vazquez-Baeza Y, Wang M, Bokulich NA, Watters A, Song SJ, Bonneau R, Dorrestein PC, Knight R. Morton JT, et al. Among authors: swenson tl. Nat Methods. 2021 Jan;18(1):40-41. doi: 10.1038/s41592-020-01007-0. Epub 2021 Jan 4. Nat Methods. 2021. PMID: 33398188 No abstract available.
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