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Page 1
Low-Dose Methotrexate for the Prevention of Atherosclerotic Events.
Ridker PM, Everett BM, Pradhan A, MacFadyen JG, Solomon DH, Zaharris E, Mam V, Hasan A, Rosenberg Y, Iturriaga E, Gupta M, Tsigoulis M, Verma S, Clearfield M, Libby P, Goldhaber SZ, Seagle R, Ofori C, Saklayen M, Butman S, Singh N, Le May M, Bertrand O, Johnston J, Paynter NP, Glynn RJ; CIRT Investigators. Ridker PM, et al. N Engl J Med. 2019 Feb 21;380(8):752-762. doi: 10.1056/NEJMoa1809798. Epub 2018 Nov 10. N Engl J Med. 2019. PMID: 30415610 Free PMC article. Clinical Trial.
A synthesis of ecosystem management strategies for forests in the face of chronic nitrogen deposition.
Clark CM, Richkus J, Jones PW, Phelan J, Burns DA, de Vries W, Du E, Fenn ME, Jones L, Watmough SA. Clark CM, et al. Environ Pollut. 2019 May;248:1046-1058. doi: 10.1016/j.envpol.2019.02.006. Epub 2019 Feb 8. Environ Pollut. 2019. PMID: 31091637 Review.
Only prescribed burning and thinning affected plant diversity, but with opposing and often statistically marginal effects across metrics (i.e., increased richness, decreased Shannon or Simpson diversity). Thus, it appears that no single treatment is effective in promoting …
Only prescribed burning and thinning affected plant diversity, but with opposing and often statistically marginal effects across metrics (i. …
Racial disparities in mitral valve surgery: A statewide analysis.
Pienta MJ, Theurer PF, He C, Zehr K, Drake D, Murphy E, Bolling SF, Romano MA, Prager RL, Thompson MP, Ailawadi G; Michigan Society of Thoracic and Cardiovascular Surgeons Quality Collaborative. Pienta MJ, et al. J Thorac Cardiovasc Surg. 2023 May;165(5):1815-1823.e8. doi: 10.1016/j.jtcvs.2021.11.096. Epub 2022 Mar 16. J Thorac Cardiovasc Surg. 2023. PMID: 35414409
Intrinsic Localized Modes in Proteins.
Nicolaï A, Delarue P, Senet P. Nicolaï A, et al. Sci Rep. 2015 Dec 11;5:18128. doi: 10.1038/srep18128. Sci Rep. 2015. PMID: 26658321 Free PMC article.
These nonlinear excitations arise from the anharmonicity of the protein dynamics. The ILMs were detected by computing the Shannon entropy of the protein main-chain fluctuations. In the non-native state (significantly explored at 380 K), the probability of their excitation …
These nonlinear excitations arise from the anharmonicity of the protein dynamics. The ILMs were detected by computing the Shannon ent …
Network Analytics Enabled by Generating a Pool of Network Variants from Noisy Data.
Mandviwalla A, Elsisy A, Atique MS, Kuzmin K, Gaiteri C, Szymanski BK. Mandviwalla A, et al. Entropy (Basel). 2023 Jul 26;25(8):1118. doi: 10.3390/e25081118. Entropy (Basel). 2023. PMID: 37628148 Free PMC article.
Communities of variants with frequently occurring duplicates contain persistent patterns shared by their structures. Using Shannon entropy, we can find a variant that minimizes the uncertainty for operations planned on the network. ...
Communities of variants with frequently occurring duplicates contain persistent patterns shared by their structures. Using Shannon en …
Taxonomic annotation of 16S rRNA sequences of pig intestinal samples using MG-RAST and QIIME2 generated different microbiota compositions.
Lima J, Manning T, Rutherford KM, Baima ET, Dewhurst RJ, Walsh P, Roehe R. Lima J, et al. J Microbiol Methods. 2021 Jul;186:106235. doi: 10.1016/j.mimet.2021.106235. Epub 2021 May 8. J Microbiol Methods. 2021. PMID: 33974954
At domain level, bacteria were relatively more abundant using QIIME2 than MG-RAST; at phylum level, seven taxa were identified exclusively by QIIME2; at family level, samples processed in QIIME2 showed higher evenness and richness (assessed by Shannon and Simpson indices). …
At domain level, bacteria were relatively more abundant using QIIME2 than MG-RAST; at phylum level, seven taxa were identified exclusively b …
Snapshot Surveys for Lake Monitoring, More Than a Shot in the Dark.
Mantzouki E, Beklioǧlu M, Brookes JD, Domis LNS, Dugan HA, Doubek JP, Grossart HP, Nejstgaard JC, Pollard AI, Ptacnik R, Rose KC, Sadro S, Seelen L, Skaff NK, Teubner K, Weyhenmeyer GA, Ibelings BW. Mantzouki E, et al. Front Ecol Evol. 2018;6:10.3389/fevo.2018.00201. doi: 10.3389/fevo.2018.00201. Front Ecol Evol. 2018. PMID: 32185176 Free PMC article. No abstract available.
Rank order entropy: why one metric is not enough.
McLellan MR, Ryan MD, Breneman CM. McLellan MR, et al. J Chem Inf Model. 2011 Sep 26;51(9):2302-19. doi: 10.1021/ci200170k. Epub 2011 Aug 29. J Chem Inf Model. 2011. PMID: 21875058 Free PMC article.
To address this need, this work examines the stabilities of QSAR rank order models created from representative data sets, descriptor sets, and modeling methods that were then assessed using Kendall Tau as a rank order metric, upon which the Shannon entropy was evaluated as …
To address this need, this work examines the stabilities of QSAR rank order models created from representative data sets, descriptor sets, a …
Analysis of the high-dimensional naming game with committed minorities.
Pickering W, Szymanski BK, Lim C. Pickering W, et al. Phys Rev E. 2016 May;93(5):052311. doi: 10.1103/PhysRevE.93.052311. Epub 2016 May 25. Phys Rev E. 2016. PMID: 27300914
The initial condition plays a crucial role in the ordering of the system. We find that the system with high Shannon entropy has a higher consensus time and a lower critical fraction of zealots compared to low-entropy states. ...
The initial condition plays a crucial role in the ordering of the system. We find that the system with high Shannon entropy has a hig …