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The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience.
Burns R, Roncal WG, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L, Kasthuri N, Weiler NC, Deisseroth K, Kazhdan M, Lichtman J, Reid RC, Smith SJ, Szalay AS, Vogelstein JT, Vogelstein RJ. Burns R, et al. Among authors: vogelstein rj, vogelstein jt. Sci Stat Database Manag. 2013:10.1145/2484838.2484870. doi: 10.1145/2484838.2484870. Sci Stat Database Manag. 2013. PMID: 24401992 Free PMC article.
Saturated Reconstruction of a Volume of Neocortex.
Kasthuri N, Hayworth KJ, Berger DR, Schalek RL, Conchello JA, Knowles-Barley S, Lee D, Vázquez-Reina A, Kaynig V, Jones TR, Roberts M, Morgan JL, Tapia JC, Seung HS, Roncal WG, Vogelstein JT, Burns R, Sussman DL, Priebe CE, Pfister H, Lichtman JW. Kasthuri N, et al. Among authors: vogelstein jt. Cell. 2015 Jul 30;162(3):648-61. doi: 10.1016/j.cell.2015.06.054. Cell. 2015. PMID: 26232230 Free article.
An automated images-to-graphs framework for high resolution connectomics.
Gray Roncal WR, Kleissas DM, Vogelstein JT, Manavalan P, Lillaney K, Pekala M, Burns R, Vogelstein RJ, Priebe CE, Chevillet MA, Hager GD. Gray Roncal WR, et al. Among authors: vogelstein rj, vogelstein jt. Front Neuroinform. 2015 Aug 13;9:20. doi: 10.3389/fninf.2015.00020. eCollection 2015. Front Neuroinform. 2015. PMID: 26321942 Free PMC article.
Science in the cloud (SIC): A use case in MRI connectomics.
Kiar G, Gorgolewski KJ, Kleissas D, Roncal WG, Litt B, Wandell B, Poldrack RA, Wiener M, Vogelstein RJ, Burns R, Vogelstein JT. Kiar G, et al. Among authors: vogelstein rj, vogelstein jt. Gigascience. 2017 May 1;6(5):1-10. doi: 10.1093/gigascience/gix013. Gigascience. 2017. PMID: 28327935 Free PMC article.
Whole-brain serial-section electron microscopy in larval zebrafish.
Hildebrand DGC, Cicconet M, Torres RM, Choi W, Quan TM, Moon J, Wetzel AW, Scott Champion A, Graham BJ, Randlett O, Plummer GS, Portugues R, Bianco IH, Saalfeld S, Baden AD, Lillaney K, Burns R, Vogelstein JT, Schier AF, Lee WA, Jeong WK, Lichtman JW, Engert F. Hildebrand DGC, et al. Among authors: vogelstein jt. Nature. 2017 May 18;545(7654):345-349. doi: 10.1038/nature22356. Epub 2017 May 10. Nature. 2017. PMID: 28489821 Free PMC article.
Toward Community-Driven Big Open Brain Science: Open Big Data and Tools for Structure, Function, and Genetics.
Charles AS, Falk B, Turner N, Pereira TD, Tward D, Pedigo BD, Chung J, Burns R, Ghosh SS, Kebschull JM, Silversmith W, Vogelstein JT. Charles AS, et al. Among authors: vogelstein jt. Annu Rev Neurosci. 2020 Jul 8;43:441-464. doi: 10.1146/annurev-neuro-100119-110036. Epub 2020 Apr 13. Annu Rev Neurosci. 2020. PMID: 32283996 Free PMC article. Review.
Standardizing human brain parcellations.
Lawrence RM, Bridgeford EW, Myers PE, Arvapalli GC, Ramachandran SC, Pisner DA, Frank PF, Lemmer AD, Nikolaidis A, Vogelstein JT. Lawrence RM, et al. Among authors: vogelstein jt. Sci Data. 2021 Mar 8;8(1):78. doi: 10.1038/s41597-021-00849-3. Sci Data. 2021. PMID: 33686079 Free PMC article.
90 results