Workman C - Search Results

1

No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution.

Workman C, Krogh A. Workman C, et al. Nucleic Acids Res. 1999 Dec 15;27(24):4816-22. doi: 10.1093/nar/27.24.4816. Nucleic Acids Res. 1999. PMID: 10572183 Free PMC article.

2

Prediction of human protein function from post-translational modifications and localization features.

Jensen LJ, Gupta R, Blom N, Devos D, Tamames J, Kesmir C, Nielsen H, Staerfeldt HH, Rapacki K, Workman C, Andersen CA, Knudsen S, Krogh A, Valencia A, Brunak S. Jensen LJ, et al. Among authors: workman c. J Mol Biol. 2002 Jun 21;319(5):1257-65. doi: 10.1016/S0022-2836(02)00379-0. J Mol Biol. 2002. PMID: 12079362

3

GenePublisher: Automated analysis of DNA microarray data.

Knudsen S, Workman C, Sicheritz-Ponten T, Friis C. Knudsen S, et al. Among authors: workman c. Nucleic Acids Res. 2003 Jul 1;31(13):3471-6. doi: 10.1093/nar/gkg629. Nucleic Acids Res. 2003. PMID: 12824347 Free PMC article.

4

Does rapid sequence divergence preclude RNA structure conservation in vertebrates?

Seemann SE, Mirza AH, Bang-Berthelsen CH, Garde C, Christensen-Dalsgaard M, Workman CT, Pociot F, Tommerup N, Gorodkin J, Ruzzo WL. Seemann SE, et al. Among authors: workman ct. Nucleic Acids Res. 2022 Mar 21;50(5):2452-2463. doi: 10.1093/nar/gkac067. Nucleic Acids Res. 2022. PMID: 35188540 Free PMC article.

5

A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana.

Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. Lindemose S, et al. Among authors: workman ct. Nucleic Acids Res. 2014 Jul;42(12):7681-93. doi: 10.1093/nar/gku502. Epub 2014 Jun 9. Nucleic Acids Res. 2014. PMID: 24914054 Free PMC article.

6

Comprehensive profiling of the fission yeast transcription start site activity during stress and media response.

Thodberg M, Thieffry A, Bornholdt J, Boyd M, Holmberg C, Azad A, Workman CT, Chen Y, Ekwall K, Nielsen O, Sandelin A. Thodberg M, et al. Among authors: workman ct. Nucleic Acids Res. 2019 Feb 28;47(4):1671-1691. doi: 10.1093/nar/gky1227. Nucleic Acids Res. 2019. PMID: 30566651 Free PMC article.

7

Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage.

Portmann S, Grimm S, Workman C, Usman N, Egli M. Portmann S, et al. Among authors: workman c. Chem Biol. 1996 Mar;3(3):173-84. doi: 10.1016/s1074-5521(96)90260-4. Chem Biol. 1996. PMID: 8807843

8

The identification and functional annotation of RNA structures conserved in vertebrates.

Seemann SE, Mirza AH, Hansen C, Bang-Berthelsen CH, Garde C, Christensen-Dalsgaard M, Torarinsson E, Yao Z, Workman CT, Pociot F, Nielsen H, Tommerup N, Ruzzo WL, Gorodkin J. Seemann SE, et al. Among authors: workman ct. Genome Res. 2017 Aug;27(8):1371-1383. doi: 10.1101/gr.208652.116. Epub 2017 May 9. Genome Res. 2017. PMID: 28487280 Free PMC article.

9

ANN-Spec: a method for discovering transcription factor binding sites with improved specificity.

Workman CT, Stormo GD. Workman CT, et al. Pac Symp Biocomput. 2000:467-78. doi: 10.1142/9789814447331_0044. Pac Symp Biocomput. 2000. PMID: 10902194 Free article.

10

Neural network predicts sequence of TP53 gene based on DNA chip.

Spicker JS, Wikman F, Lu ML, Cordon-Cardo C, Workman C, ØRntoft TF, Brunak S, Knudsen S. Spicker JS, et al. Among authors: workman c. Bioinformatics. 2002 Aug;18(8):1133-4. doi: 10.1093/bioinformatics/18.8.1133. Bioinformatics. 2002. PMID: 12176837

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