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A community computational challenge to predict the activity of pairs of compounds.
Bansal M, Yang J, Karan C, Menden MP, Costello JC, Tang H, Xiao G, Li Y, Allen J, Zhong R, Chen B, Kim M, Wang T, Heiser LM, Realubit R, Mattioli M, Alvarez MJ, Shen Y; NCI-DREAM Community; Gallahan D, Singer D, Saez-Rodriguez J, Xie Y, Stolovitzky G, Califano A; NCI-DREAM Community. Bansal M, et al. Among authors: xie y. Nat Biotechnol. 2014 Dec;32(12):1213-22. doi: 10.1038/nbt.3052. Epub 2014 Nov 17. Nat Biotechnol. 2014. PMID: 25419740 Free PMC article.
A novel approach to DNA copy number data segmentation.
Wang S, Wang Y, Xie Y, Xiao G. Wang S, et al. Among authors: xie y. J Bioinform Comput Biol. 2011 Feb;9(1):131-48. doi: 10.1142/s0219720011005343. J Bioinform Comput Biol. 2011. PMID: 21328710 Free PMC article.
Image-based genome-wide siRNA screen identifies selective autophagy factors.
Orvedahl A, Sumpter R Jr, Xiao G, Ng A, Zou Z, Tang Y, Narimatsu M, Gilpin C, Sun Q, Roth M, Forst CV, Wrana JL, Zhang YE, Luby-Phelps K, Xavier RJ, Xie Y, Levine B. Orvedahl A, et al. Among authors: xie y. Nature. 2011 Dec 1;480(7375):113-7. doi: 10.1038/nature10546. Nature. 2011. PMID: 22020285 Free PMC article.
Probe mapping across multiple microarray platforms.
Allen JD, Wang S, Chen M, Girard L, Minna JD, Xie Y, Xiao G. Allen JD, et al. Among authors: xie y. Brief Bioinform. 2012 Sep;13(5):547-54. doi: 10.1093/bib/bbr076. Epub 2011 Dec 23. Brief Bioinform. 2012. PMID: 22199380 Free PMC article.
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