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2014 1
2015 1
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2017 2
2018 8
2019 13
2020 13
2021 20
2022 19
2023 14
2024 6

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Page 1
Identification of a tumour immune barrier in the HCC microenvironment that determines the efficacy of immunotherapy.
Liu Y, Xun Z, Ma K, Liang S, Li X, Zhou S, Sun L, Liu Y, Du Y, Guo X, Cui T, Zhou H, Wang J, Yin D, Song R, Zhang S, Cai W, Meng F, Guo H, Zhang B, Yang D, Bao R, Hu Q, Wang J, Ye Y, Liu L. Liu Y, et al. Among authors: ye y. J Hepatol. 2023 Apr;78(4):770-782. doi: 10.1016/j.jhep.2023.01.011. Epub 2023 Jan 26. J Hepatol. 2023. PMID: 36708811
ADORA1 Inhibition Promotes Tumor Immune Evasion by Regulating the ATF3-PD-L1 Axis.
Liu H, Kuang X, Zhang Y, Ye Y, Li J, Liang L, Xie Z, Weng L, Guo J, Li H, Ma F, Chen X, Zhao S, Su J, Yang N, Fang F, Xie Y, Tao J, Zhang J, Chen M, Peng C, Sun L, Zhang X, Liu J, Han L, Xu X, Hung MC, Chen X. Liu H, et al. Among authors: ye y. Cancer Cell. 2020 Mar 16;37(3):324-339.e8. doi: 10.1016/j.ccell.2020.02.006. Cancer Cell. 2020. PMID: 32183950 Free article.
tRNA-m1A modification promotes T cell expansion via efficient MYC protein synthesis.
Liu Y, Zhou J, Li X, Zhang X, Shi J, Wang X, Li H, Miao S, Chen H, He X, Dong L, Lee GR, Zheng J, Liu RJ, Su B, Ye Y, Flavell RA, Yi C, Wu Y, Li HB. Liu Y, et al. Among authors: ye y. Nat Immunol. 2022 Oct;23(10):1433-1444. doi: 10.1038/s41590-022-01301-3. Epub 2022 Sep 22. Nat Immunol. 2022. PMID: 36138184
A noncoding RNA modulator potentiates phenylalanine metabolism in mice.
Li Y, Tan Z, Zhang Y, Zhang Z, Hu Q, Liang K, Jun Y, Ye Y, Li YC, Li C, Liao L, Xu J, Xing Z, Pan Y, Chatterjee SS, Nguyen TK, Hsiao H, Egranov SD, Putluri N, Coarfa C, Hawke DH, Gunaratne PH, Tsai KL, Han L, Hung MC, Calin GA, Namour F, Guéant JL, Muntau AC, Blau N, Sutton VR, Schiff M, Feillet F, Zhang S, Lin C, Yang L. Li Y, et al. Among authors: ye y. Science. 2021 Aug 6;373(6555):662-673. doi: 10.1126/science.aba4991. Science. 2021. PMID: 34353949 Free PMC article.
MAP3K2-regulated intestinal stromal cells define a distinct stem cell niche.
Wu N, Sun H, Zhao X, Zhang Y, Tan J, Qi Y, Wang Q, Ng M, Liu Z, He L, Niu X, Chen L, Liu Z, Li HB, Zeng YA, Roulis M, Liu D, Cheng J, Zhou B, Ng LG, Zou D, Ye Y, Flavell RA, Ginhoux F, Su B. Wu N, et al. Among authors: ye y. Nature. 2021 Apr;592(7855):606-610. doi: 10.1038/s41586-021-03283-y. Epub 2021 Mar 3. Nature. 2021. PMID: 33658717
Molecular mechanisms of snoRNA-IL-15 crosstalk in adipocyte lipolysis and NK cell rejuvenation.
Zhang Y, Zhao Z, Huang LA, Liu Y, Yao J, Sun C, Li Y, Zhang Z, Ye Y, Yuan F, Nguyen TK, Garlapati NR, Wu A, Egranov SD, Caudle AS, Sahin AA, Lim B, Beretta L, Calin GA, Yu D, Hung MC, Curran MA, Rezvani K, Gan B, Tan Z, Han L, Lin C, Yang L. Zhang Y, et al. Among authors: ye y. Cell Metab. 2023 Aug 8;35(8):1457-1473.e13. doi: 10.1016/j.cmet.2023.05.009. Epub 2023 Jun 16. Cell Metab. 2023. PMID: 37329887 Free article.
Hormonal therapies up-regulate MANF and overcome female susceptibility to immune checkpoint inhibitor myocarditis.
Zhang Y, Sun C, Li Y, Qin J, Amancherla K, Jing Y, Hu Q, Liang K, Zhang Z, Ye Y, Huang LA, Nguyen TK, Egranov SD, Zhao Z, Wu A, Xi Y, Yao J, Hung MC, Calin GA, Cheng J, Lim B, Lehmann LH, Salem JE, Johnson DB, Curran MA, Yu D, Han L, Darabi R, Yang L, Moslehi JJ, Lin C. Zhang Y, et al. Among authors: ye y. Sci Transl Med. 2022 Nov 2;14(669):eabo1981. doi: 10.1126/scitranslmed.abo1981. Epub 2022 Nov 2. Sci Transl Med. 2022. PMID: 36322628 Free PMC article.
Single-cell transcriptomic landscape reveals tumor specific innate lymphoid cells associated with colorectal cancer progression.
Qi J, Crinier A, Escalière B, Ye Y, Wang Z, Zhang T, Batista L, Liu H, Hong L, Wu N, Zhang M, Chen L, Liu Y, Shen L, Narni-Mancinelli E, Vivier E, Su B. Qi J, et al. Among authors: ye y. Cell Rep Med. 2021 Jul 27;2(8):100353. doi: 10.1016/j.xcrm.2021.100353. eCollection 2021 Aug 17. Cell Rep Med. 2021. PMID: 34467243 Free PMC article.
Characterization of intratumor microbiome in cancer immunotherapy.
Zhang Z, Gao Q, Ren X, Luo M, Liu Y, Liu P, Liu Y, Ye Y, Chen X, Liu H, Han L. Zhang Z, et al. Among authors: ye y. Innovation (Camb). 2023 Jul 12;4(5):100482. doi: 10.1016/j.xinn.2023.100482. eCollection 2023 Sep 11. Innovation (Camb). 2023. PMID: 37560331 Free PMC article. Review. No abstract available.
DNA repair mechanisms that promote insertion-deletion events during immunoglobulin gene diversification.
Hao Q, Zhan C, Lian C, Luo S, Cao W, Wang B, Xie X, Ye X, Gui T, Voena C, Pighi C, Wang Y, Tian Y, Wang X, Dai P, Cai Y, Liu X, Ouyang S, Sun S, Hu Q, Liu J, Ye Y, Zhao J, Lu A, Wang JY, Huang C, Su B, Meng FL, Chiarle R, Pan-Hammarström Q, Yeap LS. Hao Q, et al. Among authors: ye y. Sci Immunol. 2023 Mar 31;8(81):eade1167. doi: 10.1126/sciimmunol.ade1167. Epub 2023 Mar 24. Sci Immunol. 2023. PMID: 36961908 Free PMC article.
Autophagy and Immune-Related Diseases.
Tan P, Ye Y, Mao J, He L. Tan P, et al. Among authors: ye y. Adv Exp Med Biol. 2019;1209:167-179. doi: 10.1007/978-981-15-0606-2_10. Adv Exp Med Biol. 2019. PMID: 31728870 Review.
Tumor-associated nonmyelinating Schwann cell-expressed PVT1 promotes pancreatic cancer kynurenine pathway and tumor immune exclusion.
Sun C, Ye Y, Tan Z, Liu Y, Li Y, Hu W, Liang K, Egranov SD, Huang LA, Zhang Z, Zhang Y, Yao J, Nguyen TK, Zhao Z, Wu A, Marks JR, Caudle AS, Sahin AA, Gao J, Gammon ST, Piwnica-Worms D, Hu J, Chiao PJ, Yu D, Hung MC, Curran MA, Calin GA, Ying H, Han L, Lin C, Yang L. Sun C, et al. Among authors: ye y. Sci Adv. 2023 Feb 3;9(5):eadd6995. doi: 10.1126/sciadv.add6995. Epub 2023 Feb 1. Sci Adv. 2023. PMID: 36724291 Free PMC article.
Maximizing the Utility of Cancer Transcriptomic Data.
Xiang Y, Ye Y, Zhang Z, Han L. Xiang Y, et al. Among authors: ye y. Trends Cancer. 2018 Dec;4(12):823-837. doi: 10.1016/j.trecan.2018.09.009. Epub 2018 Oct 14. Trends Cancer. 2018. PMID: 30470304 Review.
25-Hydroxycholesterol regulates lysosome AMP kinase activation and metabolic reprogramming to educate immunosuppressive macrophages.
Xiao J, Wang S, Chen L, Ding X, Dang Y, Han M, Zheng Y, Shen H, Wu S, Wang M, Yang D, Li N, Dong C, Hu M, Su C, Li W, Hui L, Ye Y, Tang H, Wei B, Wang H. Xiao J, et al. Among authors: ye y. Immunity. 2024 Apr 12:S1074-7613(24)00142-0. doi: 10.1016/j.immuni.2024.03.021. Online ahead of print. Immunity. 2024. PMID: 38640930
Lysosome lipid signalling from the periphery to neurons regulates longevity.
Savini M, Folick A, Lee YT, Jin F, Cuevas A, Tillman MC, Duffy JD, Zhao Q, Neve IA, Hu PW, Yu Y, Zhang Q, Ye Y, Mair WB, Wang J, Han L, Ortlund EA, Wang MC. Savini M, et al. Among authors: ye y. Nat Cell Biol. 2022 Jun;24(6):906-916. doi: 10.1038/s41556-022-00926-8. Epub 2022 Jun 9. Nat Cell Biol. 2022. PMID: 35681008 Free PMC article.
High-dimensional single-cell proteomics analysis of esophageal squamous cell carcinoma reveals dynamic alterations of the tumor immune microenvironment after neoadjuvant therapy.
Han D, Han Y, Guo W, Wei W, Yang S, Xiang J, Che J, Zhu L, Hang J, van den Ende T, van Laarhoven HWM, Li B, Ye Y, Li H. Han D, et al. Among authors: ye y. J Immunother Cancer. 2023 Nov 28;11(11):e007847. doi: 10.1136/jitc-2023-007847. J Immunother Cancer. 2023. PMID: 38016720 Free PMC article.
DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations.
Song Q, Li M, Li Q, Lu X, Song K, Zhang Z, Wei J, Zhang L, Wei J, Ye Y, Zha J, Zhang Q, Gao Q, Long J, Liu X, Lu X, Zhang J. Song Q, et al. Among authors: ye y. Nucleic Acids Res. 2023 Jul 5;51(W1):W129-W133. doi: 10.1093/nar/gkad295. Nucleic Acids Res. 2023. PMID: 37078611 Free PMC article.
The Beneficial Role of Sunitinib in Tumor Immune Surveillance by Regulating Tumor PD-L1.
Li H, Kuang X, Liang L, Ye Y, Zhang Y, Li J, Ma F, Tao J, Lei G, Zhao S, Su J, Yang N, Peng C, Xu X, Hung MC, Han L, Liu H, Liu J, Chen X. Li H, et al. Among authors: ye y. Adv Sci (Weinh). 2020 Nov 27;8(2):2001596. doi: 10.1002/advs.202001596. eCollection 2021 Jan. Adv Sci (Weinh). 2020. PMID: 33510997 Free PMC article.
APAatlas: decoding alternative polyadenylation across human tissues.
Hong W, Ruan H, Zhang Z, Ye Y, Liu Y, Li S, Jing Y, Zhang H, Diao L, Liang H, Han L. Hong W, et al. Among authors: ye y. Nucleic Acids Res. 2020 Jan 8;48(D1):D34-D39. doi: 10.1093/nar/gkz876. Nucleic Acids Res. 2020. PMID: 31586392 Free PMC article.
Profiling of immune features to predict immunotherapy efficacy.
Ye Y, Zhang Y, Yang N, Gao Q, Ding X, Kuang X, Bao R, Zhang Z, Sun C, Zhou B, Wang L, Hu Q, Lin C, Gao J, Lou Y, Lin SH, Diao L, Liu H, Chen X, Mills GB, Han L. Ye Y, et al. Innovation (Camb). 2021 Dec 2;3(1):100194. doi: 10.1016/j.xinn.2021.100194. eCollection 2022 Jan 25. Innovation (Camb). 2021. PMID: 34977836 Free PMC article.
LncRNAs-directed PTEN enzymatic switch governs epithelial-mesenchymal transition.
Hu Q, Li C, Wang S, Li Y, Wen B, Zhang Y, Liang K, Yao J, Ye Y, Hsiao H, Nguyen TK, Park PK, Egranov SD, Hawke DH, Marks JR, Han L, Hung MC, Zhang B, Lin C, Yang L. Hu Q, et al. Among authors: ye y. Cell Res. 2019 Apr;29(4):286-304. doi: 10.1038/s41422-018-0134-3. Epub 2019 Jan 10. Cell Res. 2019. PMID: 30631154 Free PMC article.
Single-cell transcriptomics reveal distinct immune-infiltrating phenotypes and macrophage-tumor interaction axes among different lineages of pituitary neuroendocrine tumors.
Lin S, Dai Y, Han C, Han T, Zhao L, Wu R, Liu J, Zhang B, Huang N, Liu Y, Lai S, Shi J, Wang Y, Lou M, Xie J, Cheng Y, Tang H, Yao H, Fang H, Zhang Y, Wu X, Shen L, Ye Y, Xue L, Wu ZB. Lin S, et al. Among authors: ye y. Genome Med. 2024 Apr 24;16(1):60. doi: 10.1186/s13073-024-01325-4. Genome Med. 2024. PMID: 38658971 Free PMC article.
ARRB2 promotes colorectal cancer growth through triggering WTAP.
Liang H, Lin Z, Ye Y, Luo R, Zeng L. Liang H, et al. Among authors: ye y. Acta Biochim Biophys Sin (Shanghai). 2021 Jan 12;53(1):85-93. doi: 10.1093/abbs/gmaa151. Acta Biochim Biophys Sin (Shanghai). 2021. PMID: 33367479 Free article.
ZHX2 promotes HIF1α oncogenic signaling in triple-negative breast cancer.
Fang W, Liao C, Shi R, Simon JM, Ptacek TS, Zurlo G, Ye Y, Han L, Fan C, Bao L, Ortiz CL, Lin HR, Manocha U, Luo W, Peng Y, Kim WY, Yang LW, Zhang Q. Fang W, et al. Among authors: ye y. Elife. 2021 Nov 15;10:e70412. doi: 10.7554/eLife.70412. Elife. 2021. PMID: 34779768 Free PMC article.
Comprehensive Characterization of Alternative Polyadenylation in Human Cancer.
Xiang Y, Ye Y, Lou Y, Yang Y, Cai C, Zhang Z, Mills T, Chen NY, Kim Y, Muge Ozguc F, Diao L, Karmouty-Quintana H, Xia Y, Kellems RE, Chen Z, Blackburn MR, Yoo SH, Shyu AB, Mills GB, Han L. Xiang Y, et al. Among authors: ye y. J Natl Cancer Inst. 2018 Apr 1;110(4):379-389. doi: 10.1093/jnci/djx223. J Natl Cancer Inst. 2018. PMID: 29106591 Free PMC article.
Characterization of Hypoxia-associated Molecular Features to Aid Hypoxia-Targeted Therapy.
Ye Y, Hu Q, Chen H, Liang K, Yuan Y, Xiang Y, Ruan H, Zhang Z, Song A, Zhang H, Liu L, Diao L, Lou Y, Zhou B, Wang L, Zhou S, Gao J, Jonasch E, Lin SH, Xia Y, Lin C, Yang L, Mills GB, Liang H, Han L. Ye Y, et al. Nat Metab. 2019 Apr;1(4):431-444. doi: 10.1038/s42255-019-0045-8. Epub 2019 Mar 18. Nat Metab. 2019. PMID: 31984309 Free PMC article.
Kynurenine derivative 3-HAA is an agonist ligand for transcription factor YY1.
Shi Z, Gan G, Xu X, Zhang J, Yuan Y, Bi B, Gao X, Xu P, Zeng W, Li J, Ye Y, Zhou A, Zhang N, Liu W, Lin S, Mi J. Shi Z, et al. Among authors: ye y. J Hematol Oncol. 2021 Sep 25;14(1):153. doi: 10.1186/s13045-021-01165-4. J Hematol Oncol. 2021. PMID: 34563230 Free PMC article.
Oncogenic lncRNA downregulates cancer cell antigen presentation and intrinsic tumor suppression.
Hu Q, Ye Y, Chan LC, Li Y, Liang K, Lin A, Egranov SD, Zhang Y, Xia W, Gong J, Pan Y, Chatterjee SS, Yao J, Evans KW, Nguyen TK, Park PK, Liu J, Coarfa C, Donepudi SR, Putluri V, Putluri N, Sreekumar A, Ambati CR, Hawke DH, Marks JR, Gunaratne PH, Caudle AS, Sahin AA, Hortobagyi GN, Meric-Bernstam F, Chen L, Yu D, Hung MC, Curran MA, Han L, Lin C, Yang L. Hu Q, et al. Among authors: ye y. Nat Immunol. 2019 Jul;20(7):835-851. doi: 10.1038/s41590-019-0400-7. Epub 2019 Jun 3. Nat Immunol. 2019. PMID: 31160797 Free PMC article.
Comprehensive characterization of circular RNAs in ~ 1000 human cancer cell lines.
Ruan H, Xiang Y, Ko J, Li S, Jing Y, Zhu X, Ye Y, Zhang Z, Mills T, Feng J, Liu CJ, Jing J, Cao J, Zhou B, Wang L, Zhou Y, Lin C, Guo AY, Chen X, Diao L, Li W, Chen Z, He X, Mills GB, Blackburn MR, Han L. Ruan H, et al. Among authors: ye y. Genome Med. 2019 Aug 26;11(1):55. doi: 10.1186/s13073-019-0663-5. Genome Med. 2019. PMID: 31446897 Free PMC article.