Zengler K - Search Results

1

De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads.

Nagarajan H, Butler JE, Klimes A, Qiu Y, Zengler K, Ward J, Young ND, Methé BA, Palsson BØ, Lovley DR, Barrett CL. Nagarajan H, et al. Among authors: zengler k. PLoS One. 2010 Jun 8;5(6):e10922. doi: 10.1371/journal.pone.0010922. PLoS One. 2010. PMID: 20544019 Free PMC article.

2

The transcription unit architecture of the Escherichia coli genome.

Cho BK, Zengler K, Qiu Y, Park YS, Knight EM, Barrett CL, Gao Y, Palsson BØ. Cho BK, et al. Among authors: zengler k. Nat Biotechnol. 2009 Nov;27(11):1043-9. doi: 10.1038/nbt.1582. Epub 2009 Nov 1. Nat Biotechnol. 2009. PMID: 19881496 Free PMC article.

3

Structural and operational complexity of the Geobacter sulfurreducens genome.

Qiu Y, Cho BK, Park YS, Lovley D, Palsson BØ, Zengler K. Qiu Y, et al. Among authors: zengler k. Genome Res. 2010 Sep;20(9):1304-11. doi: 10.1101/gr.107540.110. Epub 2010 Jun 30. Genome Res. 2010. PMID: 20592237 Free PMC article.

4

Production of pilus-like filaments in Geobacter sulfurreducens in the absence of the type IV pilin protein PilA.

Klimes A, Franks AE, Glaven RH, Tran H, Barrett CL, Qiu Y, Zengler K, Lovley DR. Klimes A, et al. Among authors: zengler k. FEMS Microbiol Lett. 2010 Sep 1;310(1):62-8. doi: 10.1111/j.1574-6968.2010.02046.x. Epub 2010 Jun 23. FEMS Microbiol Lett. 2010. PMID: 20629752

5

A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution.

Tremblay PL, Summers ZM, Glaven RH, Nevin KP, Zengler K, Barrett CL, Qiu Y, Palsson BO, Lovley DR. Tremblay PL, et al. Among authors: zengler k. Environ Microbiol. 2011 Jan;13(1):13-23. doi: 10.1111/j.1462-2920.2010.02302.x. Environ Microbiol. 2011. PMID: 20636372

6

The challenges of integrating multi-omic data sets.

Palsson B, Zengler K. Palsson B, et al. Among authors: zengler k. Nat Chem Biol. 2010 Nov;6(11):787-9. doi: 10.1038/nchembio.462. Nat Chem Biol. 2010. PMID: 20976870 No abstract available.

7

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2.

Thiele I, Hyduke DR, Steeb B, Fankam G, Allen DK, Bazzani S, Charusanti P, Chen FC, Fleming RM, Hsiung CA, De Keersmaecker SC, Liao YC, Marchal K, Mo ML, Özdemir E, Raghunathan A, Reed JL, Shin SI, Sigurbjörnsdóttir S, Steinmann J, Sudarsan S, Swainston N, Thijs IM, Zengler K, Palsson BO, Adkins JN, Bumann D. Thiele I, et al. Among authors: zengler k. BMC Syst Biol. 2011 Jan 18;5:8. doi: 10.1186/1752-0509-5-8. BMC Syst Biol. 2011. PMID: 21244678 Free PMC article.

8

Deciphering the regulatory codes in bacterial genomes.

Cho BK, Palsson B, Zengler K. Cho BK, et al. Among authors: zengler k. Biotechnol J. 2011 Sep;6(9):1052-63. doi: 10.1002/biot.201000349. Epub 2011 Aug 15. Biotechnol J. 2011. PMID: 21845736 Review.

9

Deciphering the transcriptional regulatory logic of amino acid metabolism.

Cho BK, Federowicz S, Park YS, Zengler K, Palsson BØ. Cho BK, et al. Among authors: zengler k. Nat Chem Biol. 2011 Nov 13;8(1):65-71. doi: 10.1038/nchembio.710. Nat Chem Biol. 2011. PMID: 22082910 Free PMC article.

10

A road map for the development of community systems (CoSy) biology.

Zengler K, Palsson BO. Zengler K, et al. Nat Rev Microbiol. 2012 Mar 27;10(5):366-72. doi: 10.1038/nrmicro2763. Nat Rev Microbiol. 2012. PMID: 22450377 Review.

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