Zhou Y - Search Results

1

CancerLocator: non-invasive cancer diagnosis and tissue-of-origin prediction using methylation profiles of cell-free DNA.

Kang S, Li Q, Chen Q, Zhou Y, Park S, Lee G, Grimes B, Krysan K, Yu M, Wang W, Alber F, Sun F, Dubinett SM, Li W, Zhou XJ. Kang S, et al. Among authors: zhou y, zhou xj. Genome Biol. 2017 Mar 24;18(1):53. doi: 10.1186/s13059-017-1191-5. Genome Biol. 2017. PMID: 28335812 Free PMC article.

2

Population-based 3D genome structure analysis reveals driving forces in spatial genome organization.

Tjong H, Li W, Kalhor R, Dai C, Hao S, Gong K, Zhou Y, Li H, Zhou XJ, Le Gros MA, Larabell CA, Chen L, Alber F. Tjong H, et al. Among authors: zhou y, zhou xj. Proc Natl Acad Sci U S A. 2016 Mar 22;113(12):E1663-72. doi: 10.1073/pnas.1512577113. Epub 2016 Mar 7. Proc Natl Acad Sci U S A. 2016. PMID: 26951677 Free PMC article.

3

Mining 3D genome structure populations identifies major factors governing the stability of regulatory communities.

Dai C, Li W, Tjong H, Hao S, Zhou Y, Li Q, Chen L, Zhu B, Alber F, Jasmine Zhou X. Dai C, et al. Among authors: zhou y. Nat Commun. 2016 May 31;7:11549. doi: 10.1038/ncomms11549. Nat Commun. 2016. PMID: 27240697 Free PMC article.

4

CancerDetector: ultrasensitive and non-invasive cancer detection at the resolution of individual reads using cell-free DNA methylation sequencing data.

Li W, Li Q, Kang S, Same M, Zhou Y, Sun C, Liu CC, Matsuoka L, Sher L, Wong WH, Alber F, Zhou XJ. Li W, et al. Among authors: zhou y, zhou xj. Nucleic Acids Res. 2018 Sep 6;46(15):e89. doi: 10.1093/nar/gky423. Nucleic Acids Res. 2018. PMID: 29897492 Free PMC article.

5

Sensitive detection of tumor mutations from blood and its application to immunotherapy prognosis.

Li S, Noor ZS, Zeng W, Stackpole ML, Ni X, Zhou Y, Yuan Z, Wong WH, Agopian VG, Dubinett SM, Alber F, Li W, Garon EB, Zhou XJ. Li S, et al. Among authors: zhou y, zhou xj. Nat Commun. 2021 Jul 7;12(1):4172. doi: 10.1038/s41467-021-24457-2. Nat Commun. 2021. PMID: 34234141 Free PMC article. Clinical Trial.

6

cfTrack: A Method of Exome-Wide Mutation Analysis of Cell-free DNA to Simultaneously Monitor the Full Spectrum of Cancer Treatment Outcomes Including MRD, Recurrence, and Evolution.

Li S, Zeng W, Ni X, Zhou Y, Stackpole ML, Noor ZS, Yuan Z, Neal A, Memarzadeh S, Garon EB, Dubinett SM, Li W, Zhou XJ. Li S, et al. Among authors: zhou y, zhou xj. Clin Cancer Res. 2022 May 2;28(9):1841-1853. doi: 10.1158/1078-0432.CCR-21-1242. Clin Cancer Res. 2022. PMID: 35149536 Free PMC article.

7

Cost-effective methylome sequencing of cell-free DNA for accurately detecting and locating cancer.

Stackpole ML, Zeng W, Li S, Liu CC, Zhou Y, He S, Yeh A, Wang Z, Sun F, Li Q, Yuan Z, Yildirim A, Chen PJ, Winograd P, Tran B, Lee YT, Li PS, Noor Z, Yokomizo M, Ahuja P, Zhu Y, Tseng HR, Tomlinson JS, Garon E, French S, Magyar CE, Dry S, Lajonchere C, Geschwind D, Choi G, Saab S, Alber F, Wong WH, Dubinett SM, Aberle DR, Agopian V, Han SB, Ni X, Li W, Zhou XJ. Stackpole ML, et al. Among authors: zhou y, zhou xj. Nat Commun. 2022 Sep 29;13(1):5566. doi: 10.1038/s41467-022-32995-6. Nat Commun. 2022. PMID: 36175411 Free PMC article.

8

Comprehensive tissue deconvolution of cell-free DNA by deep learning for disease diagnosis and monitoring.

Li S, Zeng W, Ni X, Liu Q, Li W, Stackpole ML, Zhou Y, Gower A, Krysan K, Ahuja P, Lu DS, Raman SS, Hsu W, Aberle DR, Magyar CE, French SW, Han SB, Garon EB, Agopian VG, Wong WH, Dubinett SM, Zhou XJ. Li S, et al. Among authors: zhou y, zhou xj. Proc Natl Acad Sci U S A. 2023 Jul 11;120(28):e2305236120. doi: 10.1073/pnas.2305236120. Epub 2023 Jul 3. Proc Natl Acad Sci U S A. 2023. PMID: 37399400 Free PMC article.

9

Residues gating the periplasmic pathway of LacY.

Zhou Y, Nie Y, Kaback HR. Zhou Y, et al. J Mol Biol. 2009 Nov 27;394(2):219-25. doi: 10.1016/j.jmb.2009.09.043. Epub 2009 Sep 23. J Mol Biol. 2009. PMID: 19781551 Free PMC article.

10

The alternating access transport mechanism in LacY.

Kaback HR, Smirnova I, Kasho V, Nie Y, Zhou Y. Kaback HR, et al. Among authors: zhou y. J Membr Biol. 2011 Jan;239(1-2):85-93. doi: 10.1007/s00232-010-9327-5. Epub 2010 Dec 16. J Membr Biol. 2011. PMID: 21161516 Free PMC article. Review.

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