Zhu C - Search Results

1

Toward in silico Identification of Tumor Neoantigens in Immunotherapy.

Zhou C, Zhu C, Liu Q. Zhou C, et al. Among authors: zhu c. Trends Mol Med. 2019 Nov;25(11):980-992. doi: 10.1016/j.molmed.2019.08.001. Epub 2019 Sep 4. Trends Mol Med. 2019. PMID: 31494024 Review.

2

Deciphering relationship between microhomology and in-frame mutation occurrence in human CRISPR-based gene knockout.

Chuai G, Yang F, Yan J, Chen Y, Ma Q, Zhou C, Zhu C, Gu F, Liu Q. Chuai G, et al. Among authors: zhu c. Mol Ther Nucleic Acids. 2016 Jun 14;5(6):e323. doi: 10.1038/mtna.2016.35. Mol Ther Nucleic Acids. 2016. PMID: 27301063 Free PMC article. No abstract available.

3

MetaTopics: an integration tool to analyze microbial community profile by topic model.

Yan J, Chuai G, Qi T, Shao F, Zhou C, Zhu C, Yang J, Yu Y, Shi C, Kang N, He Y, Liu Q. Yan J, et al. Among authors: zhu c. BMC Genomics. 2017 Jan 25;18(Suppl 1):962. doi: 10.1186/s12864-016-3257-2. BMC Genomics. 2017. PMID: 28198670 Free PMC article.

4

Benchmarking CRISPR on-target sgRNA design.

Yan J, Chuai G, Zhou C, Zhu C, Yang J, Zhang C, Gu F, Xu H, Wei J, Liu Q. Yan J, et al. Among authors: zhu c. Brief Bioinform. 2018 Jul 20;19(4):721-724. doi: 10.1093/bib/bbx001. Brief Bioinform. 2018. PMID: 28203699

5

DeepCRISPR: optimized CRISPR guide RNA design by deep learning.

Chuai G, Ma H, Yan J, Chen M, Hong N, Xue D, Zhou C, Zhu C, Chen K, Duan B, Gu F, Qu S, Huang D, Wei J, Liu Q. Chuai G, et al. Among authors: zhu c. Genome Biol. 2018 Jun 26;19(1):80. doi: 10.1186/s13059-018-1459-4. Genome Biol. 2018. PMID: 29945655 Free PMC article.

6

C³: Consensus Cancer Driver Gene Caller.

Zhu CY, Zhou C, Chen YQ, Shen AZ, Guo ZM, Yang ZY, Ye XY, Qu S, Wei J, Liu Q. Zhu CY, et al. Genomics Proteomics Bioinformatics. 2019 Jun;17(3):311-318. doi: 10.1016/j.gpb.2018.10.004. Epub 2019 Aug 26. Genomics Proteomics Bioinformatics. 2019. PMID: 31465854 Free PMC article.

7

pTuneos: prioritizing tumor neoantigens from next-generation sequencing data.

Zhou C, Wei Z, Zhang Z, Zhang B, Zhu C, Chen K, Chuai G, Qu S, Xie L, Gao Y, Liu Q. Zhou C, et al. Among authors: zhu c. Genome Med. 2019 Oct 30;11(1):67. doi: 10.1186/s13073-019-0679-x. Genome Med. 2019. PMID: 31666118 Free PMC article.

8

Learning for single-cell assignment.

Duan B, Zhu C, Chuai G, Tang C, Chen X, Chen S, Fu S, Li G, Liu Q. Duan B, et al. Among authors: zhu c. Sci Adv. 2020 Oct 30;6(44):eabd0855. doi: 10.1126/sciadv.abd0855. Print 2020 Oct. Sci Adv. 2020. PMID: 33127686 Free PMC article.

9

iDMer: an integrative and mechanism-driven response system for identifying compound interventions for sudden virus outbreak.

Wei Z, Gao Y, Meng F, Chen X, Gong Y, Zhu C, Ju B, Zhang C, Liu Z, Liu Q. Wei Z, et al. Among authors: zhu c. Brief Bioinform. 2021 Mar 22;22(2):976-987. doi: 10.1093/bib/bbaa341. Brief Bioinform. 2021. PMID: 33302292 Free PMC article.

10

Integrating multiple references for single-cell assignment.

Duan B, Chen S, Chen X, Zhu C, Tang C, Wang S, Gao Y, Fu S, Liu Q. Duan B, et al. Among authors: zhu c. Nucleic Acids Res. 2021 Aug 20;49(14):e80. doi: 10.1093/nar/gkab380. Nucleic Acids Res. 2021. PMID: 34037791 Free PMC article.

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