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IntAct: an open source molecular interaction database.
Hermjakob H, Montecchi-Palazzi L, Lewington C, Mudali S, Kerrien S, Orchard S, Vingron M, Roechert B, Roepstorff P, Valencia A, Margalit H, Armstrong J, Bairoch A, Cesareni G, Sherman D, Apweiler R. Hermjakob H, et al. Among authors: valencia a. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D452-5. doi: 10.1093/nar/gkh052. Nucleic Acids Res. 2004. PMID: 14681455 Free PMC article.
EUCLID: automatic classification of proteins in functional classes by their database annotations.
Tamames J, Ouzounis C, Casari G, Sander C, Valencia A. Tamames J, et al. Among authors: valencia a. Bioinformatics. 1998;14(6):542-3. doi: 10.1093/bioinformatics/14.6.542. Bioinformatics. 1998. PMID: 9694995
A tool is described for the automatic classification of sequences in functional classes using their database annotations. The Euclid system is based on a simple learning procedure from examples provided by human experts. ...
A tool is described for the automatic classification of sequences in functional classes using their database annotations. The Euclid …
Automated genome sequence analysis and annotation.
Andrade MA, Brown NP, Leroy C, Hoersch S, de Daruvar A, Reich C, Franchini A, Tamames J, Valencia A, Ouzounis C, Sander C. Andrade MA, et al. Among authors: valencia a. Bioinformatics. 1999 May;15(5):391-412. doi: 10.1093/bioinformatics/15.5.391. Bioinformatics. 1999. PMID: 10366660
MetaRouter: bioinformatics for bioremediation.
Pazos F, Guijas D, Valencia A, De Lorenzo V. Pazos F, et al. Among authors: valencia a. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D588-92. doi: 10.1093/nar/gki068. Nucleic Acids Res. 2005. PMID: 15608267 Free PMC article.
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Blaschke C, Yeh A, Camon E, Colosimo M, Apweiler R, Hirschman L, Valencia A. Blaschke C, et al. Among authors: valencia a. Bioinformatics. 2005 Dec 1;21(23):4199-200. doi: 10.1093/bioinformatics/bti695. Epub 2005 Sep 29. Bioinformatics. 2005. PMID: 16195360 No abstract available.
EcID. A database for the inference of functional interactions in E. coli.
Andres Leon E, Ezkurdia I, García B, Valencia A, Juan D. Andres Leon E, et al. Among authors: valencia a. Nucleic Acids Res. 2009 Jan;37(Database issue):D629-35. doi: 10.1093/nar/gkn853. Epub 2008 Nov 12. Nucleic Acids Res. 2009. PMID: 19004873 Free PMC article.
An Overview of BioCreative II.5.
Leitner F, Mardis SA, Krallinger M, Cesareni G, Hirschman LA, Valencia A. Leitner F, et al. Among authors: valencia a. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jul-Sep;7(3):385-99. doi: 10.1109/tcbb.2010.61. IEEE/ACM Trans Comput Biol Bioinform. 2010. PMID: 20704011
Identifying ELIXIR Core Data Resources.
Durinx C, McEntyre J, Appel R, Apweiler R, Barlow M, Blomberg N, Cook C, Gasteiger E, Kim JH, Lopez R, Redaschi N, Stockinger H, Teixeira D, Valencia A. Durinx C, et al. Among authors: valencia a. F1000Res. 2016 Sep 30;5:ELIXIR-2422. doi: 10.12688/f1000research.9656.2. eCollection 2016. F1000Res. 2016. PMID: 27803796 Free PMC article.
940 results