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QuASAR: quantitative allele-specific analysis of reads.
Harvey CT, Moyerbrailean GA, Davis GO, Wen X, Luca F, Pique-Regi R. Harvey CT, et al. Bioinformatics. 2015 Apr 15;31(8):1235-42. doi: 10.1093/bioinformatics/btu802. Epub 2014 Dec 4. Bioinformatics. 2015. PMID: 25480375 Free PMC article.
Bacterial infection remodels the DNA methylation landscape of human dendritic cells.
Pacis A, Tailleux L, Morin AM, Lambourne J, MacIsaac JL, Yotova V, Dumaine A, Danckaert A, Luca F, Grenier JC, Hansen KD, Gicquel B, Yu M, Pai A, He C, Tung J, Pastinen T, Kobor MS, Pique-Regi R, Gilad Y, Barreiro LB. Pacis A, et al. Genome Res. 2015 Dec;25(12):1801-11. doi: 10.1101/gr.192005.115. Epub 2015 Sep 21. Genome Res. 2015. PMID: 26392366 Free PMC article.
High-throughput allele-specific expression across 250 environmental conditions.
Moyerbrailean GA, Richards AL, Kurtz D, Kalita CA, Davis GO, Harvey CT, Alazizi A, Watza D, Sorokin Y, Hauff N, Zhou X, Wen X, Pique-Regi R, Luca F. Moyerbrailean GA, et al. Genome Res. 2016 Dec;26(12):1627-1638. doi: 10.1101/gr.209759.116. Epub 2016 Oct 19. Genome Res. 2016. PMID: 27934696 Free PMC article.
85 results