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Page 1
Automatic deep learning-driven label-free image-guided patch clamp system.
Koos K, Oláh G, Balassa T, Mihut N, Rózsa M, Ozsvár A, Tasnadi E, Barzó P, Faragó N, Puskás L, Molnár G, Molnár J, Tamás G, Horvath P. Koos K, et al. Nat Commun. 2021 Feb 10;12(1):936. doi: 10.1038/s41467-021-21291-4. Nat Commun. 2021. PMID: 33568670 Free PMC article.
nucleAIzer: A Parameter-free Deep Learning Framework for Nucleus Segmentation Using Image Style Transfer.
Hollandi R, Szkalisity A, Toth T, Tasnadi E, Molnar C, Mathe B, Grexa I, Molnar J, Balind A, Gorbe M, Kovacs M, Migh E, Goodman A, Balassa T, Koos K, Wang W, Caicedo JC, Bara N, Kovacs F, Paavolainen L, Danka T, Kriston A, Carpenter AE, Smith K, Horvath P. Hollandi R, et al. Cell Syst. 2020 May 20;10(5):453-458.e6. doi: 10.1016/j.cels.2020.04.003. Epub 2020 May 7. Cell Syst. 2020. PMID: 34222682 Free PMC article.
Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation.
Serra A, Fratello M, Federico A, Ojha R, Provenzani R, Tasnadi E, Cattelani L, Del Giudice G, Kinaret PAS, Saarimäki LA, Pavel A, Kuivanen S, Cerullo V, Vapalahti O, Horvath P, Lieto AD, Yli-Kauhaluoma J, Balistreri G, Greco D. Serra A, et al. Brief Bioinform. 2022 Jan 17;23(1):bbab507. doi: 10.1093/bib/bbab507. Brief Bioinform. 2022. PMID: 34962256 Free PMC article.
Nucleus segmentation: towards automated solutions.
Hollandi R, Moshkov N, Paavolainen L, Tasnadi E, Piccinini F, Horvath P. Hollandi R, et al. Trends Cell Biol. 2022 Apr;32(4):295-310. doi: 10.1016/j.tcb.2021.12.004. Epub 2022 Jan 21. Trends Cell Biol. 2022. PMID: 35067424 Review.
Segmentation metric misinterpretations in bioimage analysis.
Hirling D, Tasnadi E, Caicedo J, Caroprese MV, Sjögren R, Aubreville M, Koos K, Horvath P. Hirling D, et al. Nat Methods. 2024 Feb;21(2):213-216. doi: 10.1038/s41592-023-01942-8. Epub 2023 Jul 27. Nat Methods. 2024. PMID: 37500758 Free PMC article.