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PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments.
Nat Methods. 2021 Aug;18(8):937-944. doi: 10.1038/s41592-021-01187-3. Epub 2021 Jul 5.
Nat Methods. 2021.
PMID: 34226720
Free PMC article.
Author Correction: PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments.
Hershberg EA, Camplisson CK, Close JL, Attar S, Chern R, Liu Y, Akilesh S, Nicovich PR, Beliveau BJ.
Hershberg EA, et al. Among authors: camplisson ck.
Nat Methods. 2021 Oct;18(10):1265. doi: 10.1038/s41592-021-01273-6.
Nat Methods. 2021.
PMID: 34480162
No abstract available.
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Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses.
Liu S, Punthambaker S, Iyer EPR, Ferrante T, Goodwin D, Fürth D, Pawlowski AC, Jindal K, Tam JM, Mifflin L, Alon S, Sinha A, Wassie AT, Chen F, Cheng A, Willocq V, Meyer K, Ling KH, Camplisson CK, Kohman RE, Aach J, Lee JH, Yankner BA, Boyden ES, Church GM.
Liu S, et al. Among authors: camplisson ck.
Nucleic Acids Res. 2021 Jun 4;49(10):e58. doi: 10.1093/nar/gkab120.
Nucleic Acids Res. 2021.
PMID: 33693773
Free PMC article.
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Designing Oligonucleotide-Based FISH Probe Sets with PaintSHOP.
Perez MW, Camplisson CK, Beliveau BJ.
Perez MW, et al. Among authors: camplisson ck.
Methods Mol Biol. 2024;2784:177-189. doi: 10.1007/978-1-0716-3766-1_12.
Methods Mol Biol. 2024.
PMID: 38502486
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Tigerfish designs oligonucleotide-based in situ hybridization probes targeting intervals of highly repetitive DNA at the scale of genomes.
Aguilar R, Camplisson CK, Lin Q, Miga KH, Noble WS, Beliveau BJ.
Aguilar R, et al. Among authors: camplisson ck.
Nat Commun. 2024 Feb 3;15(1):1027. doi: 10.1038/s41467-024-45385-x.
Nat Commun. 2024.
PMID: 38310092
Free PMC article.
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Tigerfish designs oligonucleotide-based in situ hybridization probes targeting intervals of highly repetitive DNA at the scale of genomes.
Aguilar R, Camplisson CK, Lin Q, Miga KH, Noble WS, Beliveau BJ.
Aguilar R, et al. Among authors: camplisson ck.
bioRxiv [Preprint]. 2023 Mar 7:2023.03.06.530899. doi: 10.1101/2023.03.06.530899.
bioRxiv. 2023.
Update in:
Nat Commun. 2024 Feb 3;15(1):1027. doi: 10.1038/s41467-024-45385-x.
PMID: 36945528
Free PMC article.
Updated.
Preprint.
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Two-ply channels for faster wicking in paper-based microfluidic devices.
Camplisson CK, Schilling KM, Pedrotti WL, Stone HA, Martinez AW.
Camplisson CK, et al.
Lab Chip. 2015 Dec 7;15(23):4461-6. doi: 10.1039/c5lc01115a.
Lab Chip. 2015.
PMID: 26477676
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