Similar articles for PMID: 29394323

Year	Number of Results
2005	2
2006	2
2007	2
2008	4
2009	2
2010	4
2011	6
2012	10
2013	5
2014	11
2015	15
2016	9
2017	5
2018	13
2019	12
2020	9
2021	6
2022	13
2023	11
2024	0

1

pymzML v2.0: introducing a highly compressed and seekable gzip format.

Kösters M, Leufken J, Schulze S, Sugimoto K, Klein J, Zahedi RP, Hippler M, Leidel SA, Fufezan C. Kösters M, et al. Bioinformatics. 2018 Jul 15;34(14):2513-2514. doi: 10.1093/bioinformatics/bty046. Bioinformatics. 2018. PMID: 29394323

2

pymzML--Python module for high-throughput bioinformatics on mass spectrometry data.

Bald T, Barth J, Niehues A, Specht M, Hippler M, Fufezan C. Bald T, et al. Bioinformatics. 2012 Apr 1;28(7):1052-3. doi: 10.1093/bioinformatics/bts066. Epub 2012 Feb 2. Bioinformatics. 2012. PMID: 22302572

3

SCALCE: boosting sequence compression algorithms using locally consistent encoding.

Hach F, Numanagic I, Alkan C, Sahinalp SC. Hach F, et al. Bioinformatics. 2012 Dec 1;28(23):3051-7. doi: 10.1093/bioinformatics/bts593. Epub 2012 Oct 9. Bioinformatics. 2012. PMID: 23047557 Free PMC article.

4

mspack: efficient lossless and lossy mass spectrometry data compression.

Hanau F, Röst H, Ochoa I. Hanau F, et al. Bioinformatics. 2021 Nov 5;37(21):3923-3925. doi: 10.1093/bioinformatics/btab636. Bioinformatics. 2021. PMID: 34478503

5

smallWig: parallel compression of RNA-seq WIG files.

Wang Z, Weissman T, Milenkovic O. Wang Z, et al. Bioinformatics. 2016 Jan 15;32(2):173-80. doi: 10.1093/bioinformatics/btv561. Epub 2015 Sep 30. Bioinformatics. 2016. PMID: 26424856 Free PMC article.

6

METHCOMP: a special purpose compression platform for DNA methylation data.

Peng J, Milenkovic O, Ochoa I. Peng J, et al. Bioinformatics. 2018 Aug 1;34(15):2654-2656. doi: 10.1093/bioinformatics/bty143. Bioinformatics. 2018. PMID: 29528370 Free PMC article.

7

StackZDPD: a novel encoding scheme for mass spectrometry data optimized for speed and compression ratio.

Wang J, Lu M, Wang R, An S, Xie C, Yu C. Wang J, et al. Sci Rep. 2022 Mar 30;12(1):5384. doi: 10.1038/s41598-022-09432-1. Sci Rep. 2022. PMID: 35354909 Free PMC article.

8

BUSZ: compressed BUS files.

Einarsson PH, Melsted P. Einarsson PH, et al. Bioinformatics. 2023 May 4;39(5):btad295. doi: 10.1093/bioinformatics/btad295. Bioinformatics. 2023. PMID: 37129540 Free PMC article.

9

CSAM: Compressed SAM format.

Cánovas R, Moffat A, Turpin A. Cánovas R, et al. Bioinformatics. 2016 Dec 15;32(24):3709-3716. doi: 10.1093/bioinformatics/btw543. Epub 2016 Aug 18. Bioinformatics. 2016. PMID: 27540265

10

MetaCRAM: an integrated pipeline for metagenomic taxonomy identification and compression.

Kim M, Zhang X, Ligo JG, Farnoud F, Veeravalli VV, Milenkovic O. Kim M, et al. BMC Bioinformatics. 2016 Feb 19;17:94. doi: 10.1186/s12859-016-0932-x. BMC Bioinformatics. 2016. PMID: 26895947 Free PMC article.

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