Casadio R - Search Results

1

A data base of minimally frustrated alpha helical segments extracted from proteins according to an entropy criterion.

Casadio R, Compiani M, Fariselli P, Martelli PL. Casadio R, et al. Proc Int Conf Intell Syst Mol Biol. 1999:68-76. Proc Int Conf Intell Syst Mol Biol. 1999. PMID: 10786288

2

LGANN: a parallel system combining a local genetic algorithm and neural networks for the prediction of secondary structure of proteins.

Vivarelli F, Giusti G, Villani M, Campanini R, Fariselli P, Compiani M, Casadio R. Vivarelli F, et al. Among authors: casadio r. Comput Appl Biosci. 1995 Jun;11(3):253-60. doi: 10.1093/bioinformatics/11.3.253. Comput Appl Biosci. 1995. PMID: 7583693

3

Predicting free energy contributions to the conformational stability of folded proteins from the residue sequence with radial basis function networks.

Casadio R, Compiani M, Fariselli P, Vivarelli F. Casadio R, et al. Proc Int Conf Intell Syst Mol Biol. 1995;3:81-8. Proc Int Conf Intell Syst Mol Biol. 1995. PMID: 7584470

4

Characterization of 9-aminoacridine interaction with chromatophore membranes and modelling of the probe response to artificially induced transmembrane delta pH values.

Casadio R, Di Bernardo S, Fariselli P, Melandri BA. Casadio R, et al. Biochim Biophys Acta. 1995 Jul 6;1237(1):23-30. doi: 10.1016/0005-2736(95)00075-e. Biochim Biophys Acta. 1995. PMID: 7619838 Free article.

5

The effect of membranes on the conformation of neuromedin C.

Polverini E, Neyroz P, Fariselli P, Casadio R, Masotti L. Polverini E, et al. Among authors: casadio r. Biochem Biophys Res Commun. 1995 Sep 14;214(2):663-8. doi: 10.1006/bbrc.1995.2337. Biochem Biophys Res Commun. 1995. PMID: 7677779

6

Transmembrane helices predicted at 95% accuracy.

Rost B, Casadio R, Fariselli P, Sander C. Rost B, et al. Among authors: casadio r. Protein Sci. 1995 Mar;4(3):521-33. doi: 10.1002/pro.5560040318. Protein Sci. 1995. PMID: 7795533 Free PMC article.

7

Predicting secondary structures of membrane proteins with neural networks.

Fariselli P, Compiani M, Casadio R. Fariselli P, et al. Among authors: casadio r. Eur Biophys J. 1993;22(1):41-51. doi: 10.1007/BF00205811. Eur Biophys J. 1993. PMID: 8513752

8

HTP: a neural network-based method for predicting the topology of helical transmembrane domains in proteins.

Fariselli P, Casadio R. Fariselli P, et al. Among authors: casadio r. Comput Appl Biosci. 1996 Feb;12(1):41-8. doi: 10.1093/bioinformatics/12.1.41. Comput Appl Biosci. 1996. PMID: 8670618

9

Topology prediction for helical transmembrane proteins at 86% accuracy.

Rost B, Fariselli P, Casadio R. Rost B, et al. Among authors: casadio r. Protein Sci. 1996 Aug;5(8):1704-18. doi: 10.1002/pro.5560050824. Protein Sci. 1996. PMID: 8844859 Free PMC article.

Previously, we introduced a neural network system predicting locations of transmembrane helices (HTMs) based on evolutionary profiles (PHDhtm, Rost B, Casadio R, Fariselli P, Sander C, 1995, Protein Sci 4:521-533). Here, we describe an improvement and an extension o …

Previously, we introduced a neural network system predicting locations of transmembrane helices (HTMs) based on evolutionary profiles (PHDht …

10

A predictor of transmembrane alpha-helix domains of proteins based on neural networks.

Casadio R, Fariselli P, Taroni C, Compiani M. Casadio R, et al. Eur Biophys J. 1996;24(3):165-78. doi: 10.1007/BF00180274. Eur Biophys J. 1996. PMID: 8852561

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