Knight JDR - Search Results

1

Gene Information eXtension (GIX): effortless retrieval of gene product information on any website.

Knight JDR, Samavarchi-Tehrani P, Tyers M, Gingras AC. Knight JDR, et al. Nat Methods. 2019 Aug;16(8):665-666. doi: 10.1038/s41592-019-0477-9. Nat Methods. 2019. PMID: 31217594 Free PMC article.

2

ProHits-viz: a suite of web tools for visualizing interaction proteomics data.

Knight JDR, Choi H, Gupta GD, Pelletier L, Raught B, Nesvizhskii AI, Gingras AC. Knight JDR, et al. Nat Methods. 2017 Jun 29;14(7):645-646. doi: 10.1038/nmeth.4330. Nat Methods. 2017. PMID: 28661499 Free PMC article. No abstract available.

3

A web-tool for visualizing quantitative protein-protein interaction data.

Knight JD, Liu G, Zhang JP, Pasculescu A, Choi H, Gingras AC. Knight JD, et al. Proteomics. 2015 Apr;15(8):1432-6. doi: 10.1002/pmic.201400429. Epub 2015 Jan 19. Proteomics. 2015. PMID: 25422071

4

CCM-3/STRIPAK promotes seamless tube extension through endocytic recycling.

Lant B, Yu B, Goudreault M, Holmyard D, Knight JD, Xu P, Zhao L, Chin K, Wallace E, Zhen M, Gingras AC, Derry WB. Lant B, et al. Nat Commun. 2015 Mar 6;6:6449. doi: 10.1038/ncomms7449. Nat Commun. 2015. PMID: 25743393 Free article.

5

MSPLIT-DIA: sensitive peptide identification for data-independent acquisition.

Wang J, Tucholska M, Knight JD, Lambert JP, Tate S, Larsen B, Gingras AC, Bandeira N. Wang J, et al. Nat Methods. 2015 Dec;12(12):1106-8. doi: 10.1038/nmeth.3655. Nat Methods. 2015. PMID: 26550773 Free PMC article. No abstract available.

6

SAINTq: Scoring protein-protein interactions in affinity purification - mass spectrometry experiments with fragment or peptide intensity data.

Teo G, Koh H, Fermin D, Lambert JP, Knight JD, Gingras AC, Choi H. Teo G, et al. Proteomics. 2016 Aug;16(15-16):2238-45. doi: 10.1002/pmic.201500499. Epub 2016 May 27. Proteomics. 2016. PMID: 27119218

7

Data Independent Acquisition analysis in ProHits 4.0.

Liu G, Knight JD, Zhang JP, Tsou CC, Wang J, Lambert JP, Larsen B, Tyers M, Raught B, Bandeira N, Nesvizhskii AI, Choi H, Gingras AC. Liu G, et al. J Proteomics. 2016 Oct 21;149:64-68. doi: 10.1016/j.jprot.2016.04.042. Epub 2016 Apr 29. J Proteomics. 2016. PMID: 27132685 Free PMC article.

8

A proximity-dependent biotinylation map of a human cell.

Go CD, Knight JDR, Rajasekharan A, Rathod B, Hesketh GG, Abe KT, Youn JY, Samavarchi-Tehrani P, Zhang H, Zhu LY, Popiel E, Lambert JP, Coyaud É, Cheung SWT, Rajendran D, Wong CJ, Antonicka H, Pelletier L, Palazzo AF, Shoubridge EA, Raught B, Gingras AC. Go CD, et al. Among authors: knight jdr. Nature. 2021 Jul;595(7865):120-124. doi: 10.1038/s41586-021-03592-2. Epub 2021 Jun 2. Nature. 2021. PMID: 34079125

9

Author Correction: A proximity-dependent biotinylation map of a human cell.

Go CD, Knight JDR, Rajasekharan A, Rathod B, Hesketh GG, Abe KT, Youn JY, Samavarchi-Tehrani P, Zhang H, Zhu LY, Popiel E, Lambert JP, Coyaud É, Cheung SWT, Rajendran D, Wong CJ, Antonicka H, Pelletier L, Palazzo AF, Shoubridge EA, Raught B, Gingras AC. Go CD, et al. Among authors: knight jdr. Nature. 2022 Feb;602(7895):E16. doi: 10.1038/s41586-021-04308-2. Nature. 2022. PMID: 35017685 No abstract available.

10

Profiling the kinome: current capabilities and future challenges.

Knight JD, Pawson T, Gingras AC. Knight JD, et al. J Proteomics. 2013 Apr 9;81:43-55. doi: 10.1016/j.jprot.2012.10.015. Epub 2012 Oct 22. J Proteomics. 2013. PMID: 23099349 Review.

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