((Russell RB [au] AND 1991:2050[dp]) NOT (38430791[uid] OR 36882767[uid] OR 36803607[uid] OR 31246617[uid] OR 28125575[uid] OR 25422927[uid] OR 25367536[uid] OR 17606536[uid] OR 12517657[uid] OR 12239739[uid] OR 11263951[uid] OR 11136420[uid])) OR 11 - Search Results

Year	Number of Results
1991	2
1992	2
1993	3
1994	3
1995	3
1996	2
1997	2
1998	5
1999	3
2000	6
2001	8
2002	13
2003	12
2004	8
2005	9
2006	5
2007	9
2008	6
2009	6
2010	5
2011	4
2012	9
2013	1
2014	8
2015	5
2016	4
2017	6
2018	5
2019	12
2020	2
2021	4
2022	5
2023	6
2024	3

1

Reduced protein stability of 11 pathogenic missense STXBP1/MUNC18-1 variants and improved disease prediction.

André T, van Berkel AA, Singh G, Abualrous ET, Diwan GD, Schmenger T, Braun L, Malsam J, Toonen RF, Freund C, Russell RB, Verhage M, Söllner TH. André T, et al. Among authors: russell rb. Biol Psychiatry. 2024 Mar 13:S0006-3223(24)01145-4. doi: 10.1016/j.biopsych.2024.03.007. Online ahead of print. Biol Psychiatry. 2024. PMID: 38490366 Free article.

2

Multi-omic and functional analysis for classification and treatment of sarcomas with FUS-TFCP2 or EWSR1-TFCP2 fusions.

Schöpf J, Uhrig S, Heilig CE, Lee KS, Walther T, Carazzato A, Dobberkau AM, Weichenhan D, Plass C, Hartmann M, Diwan GD, Carrero ZI, Ball CR, Hohl T, Kindler T, Rudolph-Hähnel P, Helm D, Schneider M, Nilsson A, Øra I, Imle R, Banito A, Russell RB, Jones BC, Lipka DB, Glimm H, Hübschmann D, Hartmann W, Fröhling S, Scholl C. Schöpf J, et al. Among authors: russell rb. Nat Commun. 2024 Jan 2;15(1):51. doi: 10.1038/s41467-023-44360-2. Nat Commun. 2024. PMID: 38168093 Free PMC article.

3

De-Suppression of Mesenchymal Cell Identities and Variable Phenotypic Outcomes Associated with Knockout of Bbs1.

Freke GM, Martins T, Davies RJ, Beyer T, Seda M, Peskett E, Haq N, Prasai A, Otto G, Jeyabalan Srikaran J, Hernandez V, Diwan GD, Russell RB, Ueffing M, Huranova M, Boldt K, Beales PL, Jenkins D. Freke GM, et al. Among authors: russell rb. Cells. 2023 Nov 20;12(22):2662. doi: 10.3390/cells12222662. Cells. 2023. PMID: 37998397 Free PMC article.

4

DLG1 functions upstream of SDCCAG3 and IFT20 to control ciliary targeting of polycystin-2.

Rezi CK, Aslanyan MG, Diwan GD, Cheng T, Chamlali M, Junger K, Anvarian Z, Lorentzen E, Pauly KB, Afshar-Bahadori Y, Fernandes EFA, Qian F, Tosi S, Christensen ST, Pedersen SF, Strømgaard K, Russell RB, Miner JH, Mahjoub MR, Boldt K, Roepman R, Pedersen LB. Rezi CK, et al. Among authors: russell rb. bioRxiv [Preprint]. 2024 Mar 14:2023.11.10.566524. doi: 10.1101/2023.11.10.566524. bioRxiv. 2024. PMID: 37987012 Free PMC article. Preprint.

5

Chemogenetic activation of G₁₂ signaling enhances adipose tissue browning.

Ono Y, Ito R, Arai K, Singh G, Saitoh T, Russell RB, Raimondi F, Aoki J, Sakai J, Inoue A. Ono Y, et al. Among authors: russell rb. Signal Transduct Target Ther. 2023 Aug 21;8(1):307. doi: 10.1038/s41392-023-01524-2. Signal Transduct Target Ther. 2023. PMID: 37599327 Free PMC article. No abstract available.

6

Emerging Trends in the Field of Inflammation and Proteinopathy in ALS/FTD Spectrum Disorder.

De Marchi F, Franjkic T, Schito P, Russo T, Nimac J, Chami AA, Mele A, Vidatic L, Kriz J, Julien JP, Apic G, Russell RB, Rogelj B, Cannon JR, Baralle M, Agosta F, Hecimovic S, Mazzini L, Buratti E, Munitic I. De Marchi F, et al. Among authors: russell rb. Biomedicines. 2023 May 31;11(6):1599. doi: 10.3390/biomedicines11061599. Biomedicines. 2023. PMID: 37371694 Free PMC article. Review.

7

Genomic landscape of follicular lymphoma across a wide spectrum of clinical behaviors.

Mozas P, López C, Grau M, Nadeu F, Clot G, Valle S, Kulis M, Navarro A, Ramis-Zaldivar JE, González-Farré B, Rivas-Delgado A, Rivero A, Frigola G, Balagué O, Giné E, Delgado J, Villamor N, Matutes E, Magnano L, García-Sanz R, Huet S, Russell RB, Campo E, López-Guillermo A, Beà S. Mozas P, et al. Among authors: russell rb. Hematol Oncol. 2023 Oct;41(4):631-643. doi: 10.1002/hon.3132. Epub 2023 Mar 30. Hematol Oncol. 2023. PMID: 36994552

8

A targeted multi-proteomics approach generates a blueprint of the ciliary ubiquitinome.

Aslanyan MG, Doornbos C, Diwan GD, Anvarian Z, Beyer T, Junger K, van Beersum SEC, Russell RB, Ueffing M, Ludwig A, Boldt K, Pedersen LB, Roepman R. Aslanyan MG, et al. Among authors: russell rb. Front Cell Dev Biol. 2023 Jan 26;11:1113656. doi: 10.3389/fcell.2023.1113656. eCollection 2023. Front Cell Dev Biol. 2023. PMID: 36776558 Free PMC article.

9

The human signal peptidase complex acts as a quality control enzyme for membrane proteins.

Zanotti A, Coelho JPL, Kaylani D, Singh G, Tauber M, Hitzenberger M, Avci D, Zacharias M, Russell RB, Lemberg MK, Feige MJ. Zanotti A, et al. Among authors: russell rb. Science. 2022 Dec 2;378(6623):996-1000. doi: 10.1126/science.abo5672. Epub 2022 Dec 1. Science. 2022. PMID: 36454823

10

Biochemically validated structural model of the 15-subunit intraflagellar transport complex IFT-B.

Petriman NA, Loureiro-López M, Taschner M, Zacharia NK, Georgieva MM, Boegholm N, Wang J, Mourão A, Russell RB, Andersen JS, Lorentzen E. Petriman NA, et al. Among authors: russell rb. EMBO J. 2022 Dec 15;41(24):e112440. doi: 10.15252/embj.2022112440. Epub 2022 Nov 10. EMBO J. 2022. PMID: 36354106 Free PMC article.

11

Never-homozygous genetic variants in healthy populations are potential recessive disease candidates.

Schmenger T, Diwan GD, Singh G, Apic G, Russell RB. Schmenger T, et al. Among authors: russell rb. NPJ Genom Med. 2022 Sep 8;7(1):54. doi: 10.1038/s41525-022-00322-z. NPJ Genom Med. 2022. PMID: 36075934 Free PMC article.

12

The S-palmitoylome and DHHC-PAT interactome of Drosophila melanogaster S2R+ cells indicate a high degree of conservation to mammalian palmitoylomes.

Porcellato E, González-Sánchez JC, Ahlmann-Eltze C, Elsakka MA, Shapira I, Fritsch J, Navarro JA, Anders S, Russell RB, Wieland FT, Metzendorf C. Porcellato E, et al. Among authors: russell rb. PLoS One. 2022 Aug 12;17(8):e0261543. doi: 10.1371/journal.pone.0261543. eCollection 2022. PLoS One. 2022. PMID: 35960718 Free PMC article.

13

PRECOGx: exploring GPCR signaling mechanisms with deep protein representations.

Matic M, Singh G, Carli F, De Oliveira Rosa N, Miglionico P, Magni L, Gutkind JS, Russell RB, Inoue A, Raimondi F. Matic M, et al. Among authors: russell rb. Nucleic Acids Res. 2022 Jul 5;50(W1):W598-W610. doi: 10.1093/nar/gkac426. Nucleic Acids Res. 2022. PMID: 35639758 Free PMC article.

14

Focal structural variants revealed by whole genome sequencing disrupt the histone demethylase KDM4C in B-cell lymphomas.

Lopez C, Schleussner N, Bernhart SH, Kleinheinz K, Sungalee S, Sczakiel HL, Kretzmer H, Toprak UH, Glaser S, Wagener R, Ammerpohl O, Bens S, Giefing M, Sanchez JCG, Apic G, Hubschmann D, Janz M, Kreuz M, Mottok A, Muller JM, Seufert J, Hoffmann S, Korbel JO, Russell RB, Schule R, Trumper L, Klapper W, Radlwimmer B, Lichter P, Kuppers R, Schlesner M, Mathas S, Siebert R. Lopez C, et al. Among authors: russell rb. Haematologica. 2023 Feb 1;108(2):543-554. doi: 10.3324/haematol.2021.280005. Haematologica. 2023. PMID: 35522148 Free PMC article.

15

Leveraging biochemical reactions to unravel functional impacts of cancer somatic variants affecting protein interaction interfaces.

Raimondi F, Burkhart JG, Betts MJ, Russell RB, Wu G. Raimondi F, et al. Among authors: russell rb. F1000Res. 2021 Nov 3;10:1111. doi: 10.12688/f1000research.74395.3. eCollection 2021. F1000Res. 2021. PMID: 36569594 Free PMC article.

16

Next Generation Protein Structure Predictions and Genetic Variant Interpretation.

Diwan GD, Gonzalez-Sanchez JC, Apic G, Russell RB. Diwan GD, et al. Among authors: russell rb. J Mol Biol. 2021 Oct 1;433(20):167180. doi: 10.1016/j.jmb.2021.167180. Epub 2021 Aug 4. J Mol Biol. 2021. PMID: 34358547 Free article. Review.

17

Mechnetor: a web server for exploring protein mechanism and the functional context of genetic variants.

González-Sánchez JC, Ibrahim MFR, Leist IC, Weise KR, Russell RB. González-Sánchez JC, et al. Among authors: russell rb. Nucleic Acids Res. 2021 Jul 2;49(W1):W366-W374. doi: 10.1093/nar/gkab399. Nucleic Acids Res. 2021. PMID: 34076240 Free PMC article.

18

RhoGAP19D inhibits Cdc42 laterally to control epithelial cell shape and prevent invasion.

Fic W, Bastock R, Raimondi F, Los E, Inoue Y, Gallop JL, Russell RB, St Johnston D. Fic W, et al. Among authors: russell rb. J Cell Biol. 2021 Apr 5;220(4):e202009116. doi: 10.1083/jcb.202009116. J Cell Biol. 2021. PMID: 33646271 Free PMC article.

19

The Interaction of Munc18-1 Helix 11 and 12 with the Central Region of the VAMP2 SNARE Motif Is Essential for SNARE Templating and Synaptic Transmission.

André T, Classen J, Brenner P, Betts MJ, Dörr B, Kreye S, Zuidinga B, Meijer M, Russell RB, Verhage M, Söllner TH. André T, et al. Among authors: russell rb. eNeuro. 2020 Nov 5;7(6):ENEURO.0278-20.2020. doi: 10.1523/ENEURO.0278-20.2020. Print 2020 Nov/Dec. eNeuro. 2020. PMID: 33055194 Free PMC article.

20

Defining clinical subgroups and genotype-phenotype correlations in NBAS-associated disease across 110 patients.

Staufner C, Peters B, Wagner M, Alameer S, Barić I, Broué P, Bulut D, Church JA, Crushell E, Dalgıç B, Das AM, Dick A, Dikow N, Dionisi-Vici C, Distelmaier F, Bozbulut NE, Feillet F, Gonzales E, Hadzic N, Hauck F, Hegarty R, Hempel M, Herget T, Klein C, Konstantopoulou V, Kopajtich R, Kuster A, Laass MW, Lainka E, Larson-Nath C, Leibner A, Lurz E, Mayr JA, McKiernan P, Mention K, Moog U, Mungan NO, Riedhammer KM, Santer R, Palafoll IV, Vockley J, Westphal DS, Wiedemann A, Wortmann SB, Diwan GD, Russell RB, Prokisch H, Garbade SF, Kölker S, Hoffmann GF, Lenz D. Staufner C, et al. Among authors: russell rb. Genet Med. 2020 Mar;22(3):610-621. doi: 10.1038/s41436-019-0698-4. Epub 2019 Nov 25. Genet Med. 2020. PMID: 31761904 Free article.

21

Molecular switch from MYC to MYCN expression in MYC protein negative Burkitt lymphoma cases.

Mundo L, Ambrosio MR, Raimondi F, Del Porro L, Guazzo R, Mancini V, Granai M, Jim Rocca B, Lopez C, Bens S, Onyango N, Nyagol J, Abinya N, Navari M, Ndede I, Patel K, Paolo Piccaluga P, Bob R, de Santi MM, Russell RB, Lazzi S, Siebert R, Stein H, Leoncini L. Mundo L, et al. Among authors: russell rb. Blood Cancer J. 2019 Nov 20;9(12):91. doi: 10.1038/s41408-019-0252-2. Blood Cancer J. 2019. PMID: 31748534 Free PMC article.

22

Rare, functional, somatic variants in gene families linked to cancer genes: GPCR signaling as a paradigm.

Raimondi F, Inoue A, Kadji FMN, Shuai N, Gonzalez JC, Singh G, de la Vega AA, Sotillo R, Fischer B, Aoki J, Gutkind JS, Russell RB. Raimondi F, et al. Among authors: russell rb. Oncogene. 2019 Sep;38(38):6491-6506. doi: 10.1038/s41388-019-0895-2. Epub 2019 Jul 23. Oncogene. 2019. PMID: 31337866 Free PMC article.

23

Illuminating the Onco-GPCRome: Novel G protein-coupled receptor-driven oncocrine networks and targets for cancer immunotherapy.

Wu V, Yeerna H, Nohata N, Chiou J, Harismendy O, Raimondi F, Inoue A, Russell RB, Tamayo P, Gutkind JS. Wu V, et al. Among authors: russell rb. J Biol Chem. 2019 Jul 19;294(29):11062-11086. doi: 10.1074/jbc.REV119.005601. Epub 2019 Jun 5. J Biol Chem. 2019. PMID: 31171722 Free PMC article. Review.

24

Illuminating G-Protein-Coupling Selectivity of GPCRs.

Inoue A, Raimondi F, Kadji FMN, Singh G, Kishi T, Uwamizu A, Ono Y, Shinjo Y, Ishida S, Arang N, Kawakami K, Gutkind JS, Aoki J, Russell RB. Inoue A, et al. Among authors: russell rb. Cell. 2019 Jun 13;177(7):1933-1947.e25. doi: 10.1016/j.cell.2019.04.044. Epub 2019 May 31. Cell. 2019. PMID: 31160049 Free PMC article.

25

PRECOG: PREdicting COupling probabilities of G-protein coupled receptors.

Singh G, Inoue A, Gutkind JS, Russell RB, Raimondi F. Singh G, et al. Among authors: russell rb. Nucleic Acids Res. 2019 Jul 2;47(W1):W395-W401. doi: 10.1093/nar/gkz392. Nucleic Acids Res. 2019. PMID: 31143927 Free PMC article.

26

CiliaCarta: An integrated and validated compendium of ciliary genes.

van Dam TJP, Kennedy J, van der Lee R, de Vrieze E, Wunderlich KA, Rix S, Dougherty GW, Lambacher NJ, Li C, Jensen VL, Leroux MR, Hjeij R, Horn N, Texier Y, Wissinger Y, van Reeuwijk J, Wheway G, Knapp B, Scheel JF, Franco B, Mans DA, van Wijk E, Képès F, Slaats GG, Toedt G, Kremer H, Omran H, Szymanska K, Koutroumpas K, Ueffing M, Nguyen TT, Letteboer SJF, Oud MM, van Beersum SEC, Schmidts M, Beales PL, Lu Q, Giles RH, Szklarczyk R, Russell RB, Gibson TJ, Johnson CA, Blacque OE, Wolfrum U, Boldt K, Roepman R, Hernandez-Hernandez V, Huynen MA. van Dam TJP, et al. Among authors: russell rb. PLoS One. 2019 May 16;14(5):e0216705. doi: 10.1371/journal.pone.0216705. eCollection 2019. PLoS One. 2019. PMID: 31095607 Free PMC article.

27

Defective homologous recombination DNA repair as therapeutic target in advanced chordoma.

Gröschel S, Hübschmann D, Raimondi F, Horak P, Warsow G, Fröhlich M, Klink B, Gieldon L, Hutter B, Kleinheinz K, Bonekamp D, Marschal O, Chudasama P, Mika J, Groth M, Uhrig S, Krämer S, Heining C, Heilig CE, Richter D, Reisinger E, Pfütze K, Eils R, Wolf S, von Kalle C, Brandts C, Scholl C, Weichert W, Richter S, Bauer S, Penzel R, Schröck E, Stenzinger A, Schlenk RF, Brors B, Russell RB, Glimm H, Schlesner M, Fröhling S. Gröschel S, et al. Among authors: russell rb. Nat Commun. 2019 Apr 9;10(1):1635. doi: 10.1038/s41467-019-09633-9. Nat Commun. 2019. PMID: 30967556 Free PMC article.

28

Genomic and transcriptomic changes complement each other in the pathogenesis of sporadic Burkitt lymphoma.

López C, Kleinheinz K, Aukema SM, Rohde M, Bernhart SH, Hübschmann D, Wagener R, Toprak UH, Raimondi F, Kreuz M, Waszak SM, Huang Z, Sieverling L, Paramasivam N, Seufert J, Sungalee S, Russell RB, Bausinger J, Kretzmer H, Ammerpohl O, Bergmann AK, Binder H, Borkhardt A, Brors B, Claviez A, Doose G, Feuerbach L, Haake A, Hansmann ML, Hoell J, Hummel M, Korbel JO, Lawerenz C, Lenze D, Radlwimmer B, Richter J, Rosenstiel P, Rosenwald A, Schilhabel MB, Stein H, Stilgenbauer S, Stadler PF, Szczepanowski M, Weniger MA, Zapatka M, Eils R, Lichter P, Loeffler M, Möller P, Trümper L, Klapper W; ICGC MMML-Seq Consortium; Hoffmann S, Küppers R, Burkhardt B, Schlesner M, Siebert R. López C, et al. Among authors: russell rb. Nat Commun. 2019 Mar 29;10(1):1459. doi: 10.1038/s41467-019-08578-3. Nat Commun. 2019. PMID: 30926794 Free PMC article.

29

EZHIP/CXorf67 mimics K27M mutated oncohistones and functions as an intrinsic inhibitor of PRC2 function in aggressive posterior fossa ependymoma.

Hübner JM, Müller T, Papageorgiou DN, Mauermann M, Krijgsveld J, Russell RB, Ellison DW, Pfister SM, Pajtler KW, Kool M. Hübner JM, et al. Among authors: russell rb. Neuro Oncol. 2019 Jul 11;21(7):878-889. doi: 10.1093/neuonc/noz058. Neuro Oncol. 2019. PMID: 30923826 Free PMC article.

30

The mutational landscape of Burkitt-like lymphoma with 11q aberration is distinct from that of Burkitt lymphoma.

Wagener R, Seufert J, Raimondi F, Bens S, Kleinheinz K, Nagel I, Altmüller J, Thiele H, Hübschmann D, Kohler CW, Nürnberg P, Au-Yeung R, Burkhardt B, Horn H, Leoncini L, Jaffe ES, Ott G, Rymkiewicz G, Schlesner M, Russell RB, Klapper W, Siebert R. Wagener R, et al. Among authors: russell rb. Blood. 2019 Feb 28;133(9):962-966. doi: 10.1182/blood-2018-07-864025. Epub 2018 Dec 19. Blood. 2019. PMID: 30567752 Free PMC article.

31

Understanding the role of genetic variability in LRRK2 in Indian population.

Kishore A, Ashok Kumar Sreelatha A, Sturm M, von-Zweydorf F, Pihlstrøm L, Raimondi F, Russell R, Lichtner P, Banerjee M, Krishnan S, Rajan R, Puthenveedu DK, Chung SJ; International Parkinson's Disease Genomics Consortium (IPDGC); Comprehensive Unbiased Risk Factor Assessment for Genetics and Environment in Parkinson's Disease (COURAGE-PD); Bauer P, Riess O, Gloeckner CJ, Kruger R, Gasser T, Sharma M. Kishore A, et al. Mov Disord. 2019 Apr;34(4):496-505. doi: 10.1002/mds.27558. Epub 2018 Nov 28. Mov Disord. 2019. PMID: 30485545 Free PMC article.

32

Studying how genetic variants affect mechanism in biological systems.

Raimondi F, Russell RB. Raimondi F, et al. Among authors: russell rb. Essays Biochem. 2018 Oct 26;62(4):575-582. doi: 10.1042/EBC20180021. Print 2018 Oct 26. Essays Biochem. 2018. PMID: 30315099 Review.

33

Cancer genetics meets biomolecular mechanism-bridging an age-old gulf.

González-Sánchez JC, Raimondi F, Russell RB. González-Sánchez JC, et al. Among authors: russell rb. FEBS Lett. 2018 Feb;592(4):463-474. doi: 10.1002/1873-3468.12988. Epub 2018 Feb 8. FEBS Lett. 2018. PMID: 29364530 Free article. Review.

34

Landscape of nuclear transport receptor cargo specificity.

Mackmull MT, Klaus B, Heinze I, Chokkalingam M, Beyer A, Russell RB, Ori A, Beck M. Mackmull MT, et al. Among authors: russell rb. Mol Syst Biol. 2017 Dec 18;13(12):962. doi: 10.15252/msb.20177608. Mol Syst Biol. 2017. PMID: 29254951 Free PMC article.

35

Cryptogenic cholestasis in young and adults: ATP8B1, ABCB11, ABCB4, and TJP2 gene variants analysis by high-throughput sequencing.

Vitale G, Gitto S, Raimondi F, Mattiaccio A, Mantovani V, Vukotic R, D'Errico A, Seri M, Russell RB, Andreone P. Vitale G, et al. Among authors: russell rb. J Gastroenterol. 2018 Aug;53(8):945-958. doi: 10.1007/s00535-017-1423-1. Epub 2017 Dec 13. J Gastroenterol. 2018. PMID: 29238877

36

Genetic variants affecting equivalent protein family positions reflect human diversity.

Raimondi F, Betts MJ, Lu Q, Inoue A, Gutkind JS, Russell RB. Raimondi F, et al. Among authors: russell rb. Sci Rep. 2017 Oct 6;7(1):12771. doi: 10.1038/s41598-017-12971-7. Sci Rep. 2017. PMID: 28986545 Free PMC article.

37

Capturing protein communities by structural proteomics in a thermophilic eukaryote.

Kastritis PL, O'Reilly FJ, Bock T, Li Y, Rogon MZ, Buczak K, Romanov N, Betts MJ, Bui KH, Hagen WJ, Hennrich ML, Mackmull MT, Rappsilber J, Russell RB, Bork P, Beck M, Gavin AC. Kastritis PL, et al. Among authors: russell rb. Mol Syst Biol. 2017 Jul 25;13(7):936. doi: 10.15252/msb.20167412. Mol Syst Biol. 2017. PMID: 28743795 Free PMC article.

38

Corrigendum: Insights into cancer severity from biomolecular interaction mechanisms.

Raimondi F, Singh G, Betts MJ, Apic G, Vukotic R, Andreone P, Stein L, Russell RB. Raimondi F, et al. Among authors: russell rb. Sci Rep. 2017 May 3;7:46284. doi: 10.1038/srep46284. Sci Rep. 2017. PMID: 28466873 Free PMC article. No abstract available.

39

Systematic identification of phosphorylation-mediated protein interaction switches.

Betts MJ, Wichmann O, Utz M, Andre T, Petsalaki E, Minguez P, Parca L, Roth FP, Gavin AC, Bork P, Russell RB. Betts MJ, et al. Among authors: russell rb. PLoS Comput Biol. 2017 Mar 27;13(3):e1005462. doi: 10.1371/journal.pcbi.1005462. eCollection 2017 Mar. PLoS Comput Biol. 2017. PMID: 28346509 Free PMC article.

40

Insights into cancer severity from biomolecular interaction mechanisms.

Raimondi F, Singh G, Betts MJ, Apic G, Vukotic R, Andreone P, Stein L, Russell RB. Raimondi F, et al. Among authors: russell rb. Sci Rep. 2016 Oct 4;6:34490. doi: 10.1038/srep34490. Sci Rep. 2016. PMID: 27698488 Free PMC article.

41

Mutagenesis of N-terminal residues of feline foamy virus Gag reveals entirely distinct functions during capsid formation, particle assembly, Gag processing and budding.

Liu Y, Betts MJ, Lei J, Wei G, Bao Q, Kehl T, Russell RB, Löchelt M. Liu Y, et al. Among authors: russell rb. Retrovirology. 2016 Aug 22;13(1):57. doi: 10.1186/s12977-016-0291-8. Retrovirology. 2016. PMID: 27549192 Free PMC article.

42

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

Boldt K, van Reeuwijk J, Lu Q, Koutroumpas K, Nguyen TM, Texier Y, van Beersum SE, Horn N, Willer JR, Mans DA, Dougherty G, Lamers IJ, Coene KL, Arts HH, Betts MJ, Beyer T, Bolat E, Gloeckner CJ, Haidari K, Hetterschijt L, Iaconis D, Jenkins D, Klose F, Knapp B, Latour B, Letteboer SJ, Marcelis CL, Mitic D, Morleo M, Oud MM, Riemersma M, Rix S, Terhal PA, Toedt G, van Dam TJ, de Vrieze E, Wissinger Y, Wu KM, Apic G, Beales PL, Blacque OE, Gibson TJ, Huynen MA, Katsanis N, Kremer H, Omran H, van Wijk E, Wolfrum U, Kepes F, Davis EE, Franco B, Giles RH, Ueffing M, Russell RB, Roepman R; UK10K Rare Diseases Group. Boldt K, et al. Among authors: russell rb. Nat Commun. 2016 May 13;7:11491. doi: 10.1038/ncomms11491. Nat Commun. 2016. PMID: 27173435 Free PMC article.

43

Genes encoding members of the JAK-STAT pathway or epigenetic regulators are recurrently mutated in T-cell prolymphocytic leukaemia.

López C, Bergmann AK, Paul U, Murga Penas EM, Nagel I, Betts MJ, Johansson P, Ritgen M, Baumann T, Aymerich M, Jayne S, Russell RB, Campo E, Dyer MJ, Dürig J, Siebert R. López C, et al. Among authors: russell rb. Br J Haematol. 2016 Apr;173(2):265-73. doi: 10.1111/bjh.13952. Epub 2016 Feb 25. Br J Haematol. 2016. PMID: 26917488 Free article.

44

KIAA0556 is a novel ciliary basal body component mutated in Joubert syndrome.

Sanders AA, de Vrieze E, Alazami AM, Alzahrani F, Malarkey EB, Sorusch N, Tebbe L, Kuhns S, van Dam TJ, Alhashem A, Tabarki B, Lu Q, Lambacher NJ, Kennedy JE, Bowie RV, Hetterschijt L, van Beersum S, van Reeuwijk J, Boldt K, Kremer H, Kesterson RA, Monies D, Abouelhoda M, Roepman R, Huynen MH, Ueffing M, Russell RB, Wolfrum U, Yoder BK, van Wijk E, Alkuraya FS, Blacque OE. Sanders AA, et al. Among authors: russell rb. Genome Biol. 2015 Dec 29;16:293. doi: 10.1186/s13059-015-0858-z. Genome Biol. 2015. PMID: 26714646 Free PMC article.

45

DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control.

Kretzmer H, Bernhart SH, Wang W, Haake A, Weniger MA, Bergmann AK, Betts MJ, Carrillo-de-Santa-Pau E, Doose G, Gutwein J, Richter J, Hovestadt V, Huang B, Rico D, Jühling F, Kolarova J, Lu Q, Otto C, Wagener R, Arnolds J, Burkhardt B, Claviez A, Drexler HG, Eberth S, Eils R, Flicek P, Haas S, Humme M, Karsch D, Kerstens HHD, Klapper W, Kreuz M, Lawerenz C, Lenzek D, Loeffler M, López C, MacLeod RAF, Martens JHA, Kulis M, Martín-Subero JI, Möller P, Nage I, Picelli S, Vater I, Rohde M, Rosenstiel P, Rosolowski M, Russell RB, Schilhabel M, Schlesner M, Stadler PF, Szczepanowski M, Trümper L, Stunnenberg HG, Küppers R, Ammerpohl O, Lichter P, Siebert R, Hoffmann S, Radlwimmer B. Kretzmer H, et al. Among authors: russell rb. Nat Genet. 2015 Nov;47(11):1316-1325. doi: 10.1038/ng.3413. Epub 2015 Oct 5. Nat Genet. 2015. PMID: 26437030 Free PMC article.

46

The PCBP1 gene encoding poly(rC) binding protein I is recurrently mutated in Burkitt lymphoma.

Wagener R, Aukema SM, Schlesner M, Haake A, Burkhardt B, Claviez A, Drexler HG, Hummel M, Kreuz M, Loeffler M, Rosolowski M, López C, Möller P, Richter J, Rohde M, Betts MJ, Russell RB, Bernhart SH, Hoffmann S, Rosenstiel P, Schilhabel M, Szczepanowski M, Trümper L, Klapper W, Siebert R; ICGC MMML-Seq-Project; "Molecular Mechanisms in Malignant Lymphomas" Network Project of the Deutsche Krebshilfe. Wagener R, et al. Among authors: russell rb. Genes Chromosomes Cancer. 2015 Sep;54(9):555-64. doi: 10.1002/gcc.22268. Epub 2015 Jul 14. Genes Chromosomes Cancer. 2015. PMID: 26173642

47

Mechismo: predicting the mechanistic impact of mutations and modifications on molecular interactions.

Betts MJ, Lu Q, Jiang Y, Drusko A, Wichmann O, Utz M, Valtierra-Gutiérrez IA, Schlesner M, Jaeger N, Jones DT, Pfister S, Lichter P, Eils R, Siebert R, Bork P, Apic G, Gavin AC, Russell RB. Betts MJ, et al. Among authors: russell rb. Nucleic Acids Res. 2015 Jan;43(2):e10. doi: 10.1093/nar/gku1094. Epub 2014 Nov 11. Nucleic Acids Res. 2015. PMID: 25392414 Free PMC article.

48

Characterizing protein interactions employing a genome-wide siRNA cellular phenotyping screen.

Suratanee A, Schaefer MH, Betts MJ, Soons Z, Mannsperger H, Harder N, Oswald M, Gipp M, Ramminger E, Marcus G, Männer R, Rohr K, Wanker E, Russell RB, Andrade-Navarro MA, Eils R, König R. Suratanee A, et al. Among authors: russell rb. PLoS Comput Biol. 2014 Sep 25;10(9):e1003814. doi: 10.1371/journal.pcbi.1003814. eCollection 2014 Sep. PLoS Comput Biol. 2014. PMID: 25255318 Free PMC article.

49

The mutational pattern of primary lymphoma of the central nervous system determined by whole-exome sequencing.

Vater I, Montesinos-Rongen M, Schlesner M, Haake A, Purschke F, Sprute R, Mettenmeyer N, Nazzal I, Nagel I, Gutwein J, Richter J, Buchhalter I, Russell RB, Wiestler OD, Eils R, Deckert M, Siebert R. Vater I, et al. Among authors: russell rb. Leukemia. 2015 Mar;29(3):677-85. doi: 10.1038/leu.2014.264. Epub 2014 Sep 5. Leukemia. 2015. PMID: 25189415

50

SMARCA4-mutated atypical teratoid/rhabdoid tumors are associated with inherited germline alterations and poor prognosis.

Hasselblatt M, Nagel I, Oyen F, Bartelheim K, Russell RB, Schüller U, Junckerstorff R, Rosenblum M, Alassiri AH, Rossi S, Schmid I, Gottardo NG, Toledano H, Viscardi E, Balbin M, Witkowski L, Lu Q, Betts MJ, Foulkes WD, Siebert R, Frühwald MC, Schneppenheim R. Hasselblatt M, et al. Among authors: russell rb. Acta Neuropathol. 2014 Sep;128(3):453-6. doi: 10.1007/s00401-014-1323-x. Epub 2014 Jul 25. Acta Neuropathol. 2014. PMID: 25060813 No abstract available.

51

Recurrent RHOA mutations in pediatric Burkitt lymphoma treated according to the NHL-BFM protocols.

Rohde M, Richter J, Schlesner M, Betts MJ, Claviez A, Bonn BR, Zimmermann M, Damm-Welk C, Russell RB, Borkhardt A, Eils R, Hoell JI, Szczepanowski M, Oschlies I, Klapper W, Burkhardt B, Siebert R; German ICGC MMML-Seq-Project; NHL-BFM Study Group. Rohde M, et al. Among authors: russell rb. Genes Chromosomes Cancer. 2014 Nov;53(11):911-6. doi: 10.1002/gcc.22202. Epub 2014 Jul 8. Genes Chromosomes Cancer. 2014. PMID: 25044415

52

An RNAi screen identifies KIF15 as a novel regulator of the endocytic trafficking of integrin.

Eskova A, Knapp B, Matelska D, Reusing S, Arjonen A, Lisauskas T, Pepperkok R, Russell R, Eils R, Ivaska J, Kaderali L, Erfle H, Starkuviene V. Eskova A, et al. J Cell Sci. 2014 Jun 1;127(Pt 11):2433-47. doi: 10.1242/jcs.137281. Epub 2014 Mar 21. J Cell Sci. 2014. PMID: 24659801

53

Recurrent mutation of JAK3 in T-cell prolymphocytic leukemia.

Bergmann AK, Schneppenheim S, Seifert M, Betts MJ, Haake A, Lopez C, Maria Murga Penas E, Vater I, Jayne S, Dyer MJ, Schrappe M, Dührsen U, Ammerpohl O, Russell RB, Küppers R, Dürig J, Siebert R. Bergmann AK, et al. Among authors: russell rb. Genes Chromosomes Cancer. 2014 Apr;53(4):309-16. doi: 10.1002/gcc.22141. Epub 2014 Jan 21. Genes Chromosomes Cancer. 2014. PMID: 24446122

54

A recurrent 11q aberration pattern characterizes a subset of MYC-negative high-grade B-cell lymphomas resembling Burkitt lymphoma.

Salaverria I, Martin-Guerrero I, Wagener R, Kreuz M, Kohler CW, Richter J, Pienkowska-Grela B, Adam P, Burkhardt B, Claviez A, Damm-Welk C, Drexler HG, Hummel M, Jaffe ES, Küppers R, Lefebvre C, Lisfeld J, Löffler M, Macleod RA, Nagel I, Oschlies I, Rosolowski M, Russell RB, Rymkiewicz G, Schindler D, Schlesner M, Scholtysik R, Schwaenen C, Spang R, Szczepanowski M, Trümper L, Vater I, Wessendorf S, Klapper W, Siebert R; Molecular Mechanisms in Malignant Lymphoma Network Project; Berlin-Frankfurt-Münster Non-Hodgkin Lymphoma Group. Salaverria I, et al. Among authors: russell rb. Blood. 2014 Feb 20;123(8):1187-98. doi: 10.1182/blood-2013-06-507996. Epub 2014 Jan 7. Blood. 2014. PMID: 24398325 Free PMC article.

55

Molecular dissection of human Argonaute proteins by DNA shuffling.

Schürmann N, Trabuco LG, Bender C, Russell RB, Grimm D. Schürmann N, et al. Among authors: russell rb. Nat Struct Mol Biol. 2013 Jul;20(7):818-26. doi: 10.1038/nsmb.2607. Epub 2013 Jun 9. Nat Struct Mol Biol. 2013. PMID: 23748378

56

Recurrent mutation of the ID3 gene in Burkitt lymphoma identified by integrated genome, exome and transcriptome sequencing.

Richter J, Schlesner M, Hoffmann S, Kreuz M, Leich E, Burkhardt B, Rosolowski M, Ammerpohl O, Wagener R, Bernhart SH, Lenze D, Szczepanowski M, Paulsen M, Lipinski S, Russell RB, Adam-Klages S, Apic G, Claviez A, Hasenclever D, Hovestadt V, Hornig N, Korbel JO, Kube D, Langenberger D, Lawerenz C, Lisfeld J, Meyer K, Picelli S, Pischimarov J, Radlwimmer B, Rausch T, Rohde M, Schilhabel M, Scholtysik R, Spang R, Trautmann H, Zenz T, Borkhardt A, Drexler HG, Möller P, MacLeod RA, Pott C, Schreiber S, Trümper L, Loeffler M, Stadler PF, Lichter P, Eils R, Küppers R, Hummel M, Klapper W, Rosenstiel P, Rosenwald A, Brors B, Siebert R; ICGC MMML-Seq Project. Richter J, et al. Among authors: russell rb. Nat Genet. 2012 Dec;44(12):1316-20. doi: 10.1038/ng.2469. Epub 2012 Nov 11. Nat Genet. 2012. PMID: 23143595

57

Negative protein-protein interaction datasets derived from large-scale two-hybrid experiments.

Trabuco LG, Betts MJ, Russell RB. Trabuco LG, et al. Among authors: russell rb. Methods. 2012 Dec;58(4):343-8. doi: 10.1016/j.ymeth.2012.07.028. Epub 2012 Aug 4. Methods. 2012. PMID: 22884951

58

Computational identification of novel amino-acid interactions in HIV Gag via correlated evolution.

Kalinina OV, Oberwinkler H, Glass B, Kräusslich HG, Russell RB, Briggs JA. Kalinina OV, et al. Among authors: russell rb. PLoS One. 2012;7(8):e42468. doi: 10.1371/journal.pone.0042468. Epub 2012 Aug 3. PLoS One. 2012. PMID: 22879995 Free PMC article.

59

Dissecting the genomic complexity underlying medulloblastoma.

Jones DT, Jäger N, Kool M, Zichner T, Hutter B, Sultan M, Cho YJ, Pugh TJ, Hovestadt V, Stütz AM, Rausch T, Warnatz HJ, Ryzhova M, Bender S, Sturm D, Pleier S, Cin H, Pfaff E, Sieber L, Wittmann A, Remke M, Witt H, Hutter S, Tzaridis T, Weischenfeldt J, Raeder B, Avci M, Amstislavskiy V, Zapatka M, Weber UD, Wang Q, Lasitschka B, Bartholomae CC, Schmidt M, von Kalle C, Ast V, Lawerenz C, Eils J, Kabbe R, Benes V, van Sluis P, Koster J, Volckmann R, Shih D, Betts MJ, Russell RB, Coco S, Tonini GP, Schüller U, Hans V, Graf N, Kim YJ, Monoranu C, Roggendorf W, Unterberg A, Herold-Mende C, Milde T, Kulozik AE, von Deimling A, Witt O, Maass E, Rössler J, Ebinger M, Schuhmann MU, Frühwald MC, Hasselblatt M, Jabado N, Rutkowski S, von Bueren AO, Williamson D, Clifford SC, McCabe MG, Collins VP, Wolf S, Wiemann S, Lehrach H, Brors B, Scheurlen W, Felsberg J, Reifenberger G, Northcott PA, Taylor MD, Meyerson M, Pomeroy SL, Yaspo ML, Korbel JO, Korshunov A, Eils R, Pfister SM, Lichter P. Jones DT, et al. Among authors: russell rb. Nature. 2012 Aug 2;488(7409):100-5. doi: 10.1038/nature11284. Nature. 2012. PMID: 22832583 Free PMC article.

60

The structure of proteins.

Lupas AN, Russell RB. Lupas AN, et al. Among authors: russell rb. J Struct Biol. 2012 Sep;179(3):251. doi: 10.1016/j.jsb.2012.05.012. Epub 2012 May 26. J Struct Biol. 2012. PMID: 22641090 No abstract available.

61

PepSite: prediction of peptide-binding sites from protein surfaces.

Trabuco LG, Lise S, Petsalaki E, Russell RB. Trabuco LG, et al. Among authors: russell rb. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W423-7. doi: 10.1093/nar/gks398. Epub 2012 May 16. Nucleic Acids Res. 2012. PMID: 22600738 Free PMC article.

62

Topic pages: PLoS Computational Biology meets Wikipedia.

Wodak SJ, Mietchen D, Collings AM, Russell RB, Bourne PE. Wodak SJ, et al. Among authors: russell rb. PLoS Comput Biol. 2012;8(3):e1002446. doi: 10.1371/journal.pcbi.1002446. Epub 2012 Mar 29. PLoS Comput Biol. 2012. PMID: 22479174 Free PMC article. No abstract available.

63

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium.

van Noort V, Seebacher J, Bader S, Mohammed S, Vonkova I, Betts MJ, Kühner S, Kumar R, Maier T, O'Flaherty M, Rybin V, Schmeisky A, Yus E, Stülke J, Serrano L, Russell RB, Heck AJ, Bork P, Gavin AC. van Noort V, et al. Among authors: russell rb. Mol Syst Biol. 2012 Feb 28;8:571. doi: 10.1038/msb.2012.4. Mol Syst Biol. 2012. PMID: 22373819 Free PMC article.

64

ProtChemSI: a network of protein-chemical structural interactions.

Kalinina OV, Wichmann O, Apic G, Russell RB. Kalinina OV, et al. Among authors: russell rb. Nucleic Acids Res. 2012 Jan;40(Database issue):D549-53. doi: 10.1093/nar/gkr1049. Epub 2011 Nov 21. Nucleic Acids Res. 2012. PMID: 22110041 Free PMC article.

65

Content disputes in Wikipedia reflect geopolitical instability.

Apic G, Betts MJ, Russell RB. Apic G, et al. Among authors: russell rb. PLoS One. 2011;6(6):e20902. doi: 10.1371/journal.pone.0020902. Epub 2011 Jun 22. PLoS One. 2011. PMID: 21731630 Free PMC article.

66

Combinations of protein-chemical complex structures reveal new targets for established drugs.

Kalinina OV, Wichmann O, Apic G, Russell RB. Kalinina OV, et al. Among authors: russell rb. PLoS Comput Biol. 2011 May;7(5):e1002043. doi: 10.1371/journal.pcbi.1002043. Epub 2011 May 5. PLoS Comput Biol. 2011. PMID: 21573205 Free PMC article.

67

The three-dimensional molecular structure of the desmosomal plaque.

Al-Amoudi A, Castaño-Diez D, Devos DP, Russell RB, Johnson GT, Frangakis AS. Al-Amoudi A, et al. Among authors: russell rb. Proc Natl Acad Sci U S A. 2011 Apr 19;108(16):6480-5. doi: 10.1073/pnas.1019469108. Epub 2011 Apr 4. Proc Natl Acad Sci U S A. 2011. PMID: 21464301 Free PMC article.

68

A systematic screen for protein-lipid interactions in Saccharomyces cerevisiae.

Gallego O, Betts MJ, Gvozdenovic-Jeremic J, Maeda K, Matetzki C, Aguilar-Gurrieri C, Beltran-Alvarez P, Bonn S, Fernández-Tornero C, Jensen LJ, Kuhn M, Trott J, Rybin V, Müller CW, Bork P, Kaksonen M, Russell RB, Gavin AC. Gallego O, et al. Among authors: russell rb. Mol Syst Biol. 2010 Nov 30;6:430. doi: 10.1038/msb.2010.87. Mol Syst Biol. 2010. PMID: 21119626 Free PMC article.

69

Domain recombination: a workhorse for evolutionary innovation.

Apic G, Russell RB. Apic G, et al. Among authors: russell rb. Sci Signal. 2010 Sep 14;3(139):pe30. doi: 10.1126/scisignal.3139pe30. Sci Signal. 2010. PMID: 20841565

70

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies.

Mazin PV, Gelfand MS, Mironov AA, Rakhmaninova AB, Rubinov AR, Russell RB, Kalinina OV. Mazin PV, et al. Among authors: russell rb. Algorithms Mol Biol. 2010 Jul 15;5:29. doi: 10.1186/1748-7188-5-29. Algorithms Mol Biol. 2010. PMID: 20633297 Free PMC article.

71

WD40 proteins propel cellular networks.

Stirnimann CU, Petsalaki E, Russell RB, Müller CW. Stirnimann CU, et al. Among authors: russell rb. Trends Biochem Sci. 2010 Oct;35(10):565-74. doi: 10.1016/j.tibs.2010.04.003. Epub 2010 May 5. Trends Biochem Sci. 2010. PMID: 20451393 Review.

72

Modular architecture of nucleotide-binding pockets.

Gherardini PF, Ausiello G, Russell RB, Helmer-Citterich M. Gherardini PF, et al. Among authors: russell rb. Nucleic Acids Res. 2010 Jun;38(11):3809-16. doi: 10.1093/nar/gkq090. Epub 2010 Feb 25. Nucleic Acids Res. 2010. PMID: 20185567 Free PMC article.

73

Impact of genome reduction on bacterial metabolism and its regulation.

Yus E, Maier T, Michalodimitrakis K, van Noort V, Yamada T, Chen WH, Wodke JA, Güell M, Martínez S, Bourgeois R, Kühner S, Raineri E, Letunic I, Kalinina OV, Rode M, Herrmann R, Gutiérrez-Gallego R, Russell RB, Gavin AC, Bork P, Serrano L. Yus E, et al. Among authors: russell rb. Science. 2009 Nov 27;326(5957):1263-8. doi: 10.1126/science.1177263. Science. 2009. PMID: 19965476

74

Proteome organization in a genome-reduced bacterium.

Kühner S, van Noort V, Betts MJ, Leo-Macias A, Batisse C, Rode M, Yamada T, Maier T, Bader S, Beltran-Alvarez P, Castaño-Diez D, Chen WH, Devos D, Güell M, Norambuena T, Racke I, Rybin V, Schmidt A, Yus E, Aebersold R, Herrmann R, Böttcher B, Frangakis AS, Russell RB, Serrano L, Bork P, Gavin AC. Kühner S, et al. Among authors: russell rb. Science. 2009 Nov 27;326(5957):1235-40. doi: 10.1126/science.1176343. Science. 2009. PMID: 19965468

75

A more structured metabolome.

Betts MJ, Russell RB. Betts MJ, et al. Among authors: russell rb. Nat Struct Mol Biol. 2009 Nov;16(11):1125-6. doi: 10.1038/nsmb1109-1125. Nat Struct Mol Biol. 2009. PMID: 19888310 No abstract available.

76

Hb M Dothan [beta 25/26 (B7/B8)/(GGT/GAG-->GAG//Gly/Glu-->Glu]; a new mechanism of unstable methemoglobin variant and molecular characteristics.

Kutlar F, Hilliard LM, Zhuang L, Patel N, Eroglu B, Meiler SE, Carmichael H, Russell RB, Kutlar A. Kutlar F, et al. Among authors: russell rb. Blood Cells Mol Dis. 2009 Nov-Dec;43(3):235-8. doi: 10.1016/j.bcmd.2009.08.006. Epub 2009 Sep 15. Blood Cells Mol Dis. 2009. PMID: 19758826

77

Combining specificity determining and conserved residues improves functional site prediction.

Kalinina OV, Gelfand MS, Russell RB. Kalinina OV, et al. Among authors: russell rb. BMC Bioinformatics. 2009 Jun 9;10:174. doi: 10.1186/1471-2105-10-174. BMC Bioinformatics. 2009. PMID: 19508719 Free PMC article.

78

Accurate prediction of peptide binding sites on protein surfaces.

Petsalaki E, Stark A, García-Urdiales E, Russell RB. Petsalaki E, et al. Among authors: russell rb. PLoS Comput Biol. 2009 Mar;5(3):e1000335. doi: 10.1371/journal.pcbi.1000335. Epub 2009 Mar 27. PLoS Comput Biol. 2009. PMID: 19325869 Free PMC article.

79

Targeting and tinkering with interaction networks.

Russell RB, Aloy P. Russell RB, et al. Nat Chem Biol. 2008 Nov;4(11):666-73. doi: 10.1038/nchembio.119. Nat Chem Biol. 2008. PMID: 18936751 Free article. Review.

80

Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity.

Solheim SA, Petsalaki E, Stokka AJ, Russell RB, Taskén K, Berge T. Solheim SA, et al. Among authors: russell rb. FEBS J. 2008 Oct;275(19):4863-74. doi: 10.1111/j.1742-4658.2008.06626.x. Epub 2008 Aug 21. FEBS J. 2008. PMID: 18721137 Free article.

81

Understanding and predicting protein assemblies with 3D structures.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Comp Funct Genomics. 2003;4(4):410-5. doi: 10.1002/cfg.310. Comp Funct Genomics. 2003. PMID: 18629088 Free PMC article.

82

Peptide-mediated interactions in biological systems: new discoveries and applications.

Petsalaki E, Russell RB. Petsalaki E, et al. Among authors: russell rb. Curr Opin Biotechnol. 2008 Aug;19(4):344-50. doi: 10.1016/j.copbio.2008.06.004. Epub 2008 Jul 12. Curr Opin Biotechnol. 2008. PMID: 18602004

83

Subunit architecture of intact protein complexes from mass spectrometry and homology modeling.

Taverner T, Hernández H, Sharon M, Ruotolo BT, Matak-Vinković D, Devos D, Russell RB, Robinson CV. Taverner T, et al. Among authors: russell rb. Acc Chem Res. 2008 May;41(5):617-27. doi: 10.1021/ar700218q. Epub 2008 Mar 4. Acc Chem Res. 2008. PMID: 18314965

84

A careful disorderliness in the proteome: sites for interaction and targets for future therapies.

Russell RB, Gibson TJ. Russell RB, et al. FEBS Lett. 2008 Apr 9;582(8):1271-5. doi: 10.1016/j.febslet.2008.02.027. Epub 2008 Feb 20. FEBS Lett. 2008. PMID: 18284921 Free article. Review.

85

SuperTarget and Matador: resources for exploring drug-target relationships.

Günther S, Kuhn M, Dunkel M, Campillos M, Senger C, Petsalaki E, Ahmed J, Urdiales EG, Gewiess A, Jensen LJ, Schneider R, Skoblo R, Russell RB, Bourne PE, Bork P, Preissner R. Günther S, et al. Among authors: russell rb. Nucleic Acids Res. 2008 Jan;36(Database issue):D919-22. doi: 10.1093/nar/gkm862. Epub 2007 Oct 16. Nucleic Acids Res. 2008. PMID: 17942422 Free PMC article.

86

Classification of protein folds.

Russell RB. Russell RB. Mol Biotechnol. 2007 Jul;36(3):238-47. doi: 10.1007/s12033-007-0032-2. Mol Biotechnol. 2007. PMID: 17873410

87

A more complete, complexed and structured interactome.

Devos D, Russell RB. Devos D, et al. Among authors: russell rb. Curr Opin Struct Biol. 2007 Jun;17(3):370-7. doi: 10.1016/j.sbi.2007.05.011. Epub 2007 Jun 15. Curr Opin Struct Biol. 2007. PMID: 17574831 Review.

88

Systematic discovery of in vivo phosphorylation networks.

Linding R, Jensen LJ, Ostheimer GJ, van Vugt MA, Jørgensen C, Miron IM, Diella F, Colwill K, Taylor L, Elder K, Metalnikov P, Nguyen V, Pasculescu A, Jin J, Park JG, Samson LD, Woodgett JR, Russell RB, Bork P, Yaffe MB, Pawson T. Linding R, et al. Among authors: russell rb. Cell. 2007 Jun 29;129(7):1415-26. doi: 10.1016/j.cell.2007.05.052. Epub 2007 Jun 14. Cell. 2007. PMID: 17570479 Free PMC article.

89

The hard cell: from proteomics to a whole cell model.

Betts MJ, Russell RB. Betts MJ, et al. Among authors: russell rb. FEBS Lett. 2007 Jun 19;581(15):2870-6. doi: 10.1016/j.febslet.2007.05.062. Epub 2007 May 30. FEBS Lett. 2007. PMID: 17555749 Free article. Review.

90

[Computational method for prediction of protein functional sites using specificity determinants].

Kalinina OV, Rassel RB, Rakhmaninova AB, Gel'fand MS. Kalinina OV, et al. Mol Biol (Mosk). 2007 Jan-Feb;41(1):151-62. Mol Biol (Mosk). 2007. PMID: 17380902 Russian.

91

Differential localization of coatomer complex isoforms within the Golgi apparatus.

Moelleken J, Malsam J, Betts MJ, Movafeghi A, Reckmann I, Meissner I, Hellwig A, Russell RB, Söllner T, Brügger B, Wieland FT. Moelleken J, et al. Among authors: russell rb. Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4425-30. doi: 10.1073/pnas.0611360104. Epub 2007 Mar 7. Proc Natl Acad Sci U S A. 2007. PMID: 17360540

92

A shortcut to peptides to modulate platelets.

Apic G, Russell RB. Apic G, et al. Among authors: russell rb. Nat Chem Biol. 2007 Feb;3(2):83-4. doi: 10.1038/nchembio0207-83. Nat Chem Biol. 2007. PMID: 17235341 No abstract available.

93

Proline-rich regions in transcriptional complexes: heading in many directions.

Neduva V, Russell RB. Neduva V, et al. Among authors: russell rb. Sci STKE. 2007 Jan 16;2007(369):pe1. doi: 10.1126/stke.3692007pe1. Sci STKE. 2007. PMID: 17228057

94

Harry Potter and the structural biologist's (Key)stone.

Devos D, Kalinina OV, Russell RB. Devos D, et al. Among authors: russell rb. Genome Biol. 2006;7(12):333. doi: 10.1186/gb-2006-7-12-333. Genome Biol. 2006. PMID: 17201936 Free PMC article.

95

Peptides mediating interaction networks: new leads at last.

Neduva V, Russell RB. Neduva V, et al. Among authors: russell rb. Curr Opin Biotechnol. 2006 Oct;17(5):465-71. doi: 10.1016/j.copbio.2006.08.002. Epub 2006 Sep 7. Curr Opin Biotechnol. 2006. PMID: 16962311 Review.

96

DILIMOT: discovery of linear motifs in proteins.

Neduva V, Russell RB. Neduva V, et al. Among authors: russell rb. Nucleic Acids Res. 2006 Jul 1;34(Web Server issue):W350-5. doi: 10.1093/nar/gkl159. Nucleic Acids Res. 2006. PMID: 16845024 Free PMC article.

97

Structural systems biology: modelling protein interactions.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Nat Rev Mol Cell Biol. 2006 Mar;7(3):188-97. doi: 10.1038/nrm1859. Nat Rev Mol Cell Biol. 2006. PMID: 16496021 Review.

98

Proteome survey reveals modularity of the yeast cell machinery.

Gavin AC, Aloy P, Grandi P, Krause R, Boesche M, Marzioch M, Rau C, Jensen LJ, Bastuck S, Dümpelfeld B, Edelmann A, Heurtier MA, Hoffman V, Hoefert C, Klein K, Hudak M, Michon AM, Schelder M, Schirle M, Remor M, Rudi T, Hooper S, Bauer A, Bouwmeester T, Casari G, Drewes G, Neubauer G, Rick JM, Kuster B, Bork P, Russell RB, Superti-Furga G. Gavin AC, et al. Among authors: russell rb. Nature. 2006 Mar 30;440(7084):631-6. doi: 10.1038/nature04532. Epub 2006 Jan 22. Nature. 2006. PMID: 16429126

99

Animal MicroRNAs confer robustness to gene expression and have a significant impact on 3'UTR evolution.

Stark A, Brennecke J, Bushati N, Russell RB, Cohen SM. Stark A, et al. Among authors: russell rb. Cell. 2005 Dec 16;123(6):1133-46. doi: 10.1016/j.cell.2005.11.023. Cell. 2005. PMID: 16337999 Free article.

100

Systematic discovery of new recognition peptides mediating protein interaction networks.

Neduva V, Linding R, Su-Angrand I, Stark A, de Masi F, Gibson TJ, Lewis J, Serrano L, Russell RB. Neduva V, et al. Among authors: russell rb. PLoS Biol. 2005 Dec;3(12):e405. doi: 10.1371/journal.pbio.0030405. Epub 2005 Nov 15. PLoS Biol. 2005. PMID: 16279839 Free PMC article.

101

Linear motifs: evolutionary interaction switches.

Neduva V, Russell RB. Neduva V, et al. Among authors: russell rb. FEBS Lett. 2005 Jun 13;579(15):3342-5. doi: 10.1016/j.febslet.2005.04.005. Epub 2005 Apr 18. FEBS Lett. 2005. PMID: 15943979 Free article. Review.

102

Structural similarity to bridge sequence space: finding new families on the bridges.

Shah PK, Aloy P, Bork P, Russell RB. Shah PK, et al. Among authors: russell rb. Protein Sci. 2005 May;14(5):1305-14. doi: 10.1110/ps.041187405. Protein Sci. 2005. PMID: 15840833 Free PMC article.

103

Illuminating drug discovery with biological pathways.

Apic G, Ignjatovic T, Boyer S, Russell RB. Apic G, et al. Among authors: russell rb. FEBS Lett. 2005 Mar 21;579(8):1872-7. doi: 10.1016/j.febslet.2005.02.023. FEBS Lett. 2005. PMID: 15763566 Free article. Review.

104

Structure-based systems biology: a zoom lens for the cell.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. FEBS Lett. 2005 Mar 21;579(8):1854-8. doi: 10.1016/j.febslet.2005.02.014. FEBS Lett. 2005. PMID: 15763563 Free article. Review.

105

Principles of microRNA-target recognition.

Brennecke J, Stark A, Russell RB, Cohen SM. Brennecke J, et al. Among authors: russell rb. PLoS Biol. 2005 Mar;3(3):e85. doi: 10.1371/journal.pbio.0030085. PLoS Biol. 2005. PMID: 15723116 Free PMC article.

106

Protein complexes: structure prediction challenges for the 21st century.

Aloy P, Pichaud M, Russell RB. Aloy P, et al. Among authors: russell rb. Curr Opin Struct Biol. 2005 Feb;15(1):15-22. doi: 10.1016/j.sbi.2005.01.012. Curr Opin Struct Biol. 2005. PMID: 15718128 Review.

107

3did: interacting protein domains of known three-dimensional structure.

Stein A, Russell RB, Aloy P. Stein A, et al. Among authors: russell rb. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D413-7. doi: 10.1093/nar/gki037. Nucleic Acids Res. 2005. PMID: 15608228 Free PMC article.

108

Ten thousand interactions for the molecular biologist.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Nat Biotechnol. 2004 Oct;22(10):1317-21. doi: 10.1038/nbt1018. Nat Biotechnol. 2004. PMID: 15470473

109

Finding functional sites in structural genomics proteins.

Stark A, Shkumatov A, Russell RB. Stark A, et al. Among authors: russell rb. Structure. 2004 Aug;12(8):1405-12. doi: 10.1016/j.str.2004.05.012. Structure. 2004. PMID: 15296734 Free article.

110

Geminate structures of African cassava mosaic virus.

Böttcher B, Unseld S, Ceulemans H, Russell RB, Jeske H. Böttcher B, et al. Among authors: russell rb. J Virol. 2004 Jul;78(13):6758-65. doi: 10.1128/JVI.78.13.6758-6765.2004. J Virol. 2004. PMID: 15194750 Free PMC article.

111

A structural perspective on protein-protein interactions.

Russell RB, Alber F, Aloy P, Davis FP, Korkin D, Pichaud M, Topf M, Sali A. Russell RB, et al. Curr Opin Struct Biol. 2004 Jun;14(3):313-24. doi: 10.1016/j.sbi.2004.04.006. Curr Opin Struct Biol. 2004. PMID: 15193311 Review.

112

Fast fitting of atomic structures to low-resolution electron density maps by surface overlap maximization.

Ceulemans H, Russell RB. Ceulemans H, et al. Among authors: russell rb. J Mol Biol. 2004 May 7;338(4):783-93. doi: 10.1016/j.jmb.2004.02.066. J Mol Biol. 2004. PMID: 15099745

113

Systematic searches for molecular synapomorphies in model metazoan genomes give some support for Ecdysozoa after accounting for the idiosyncrasies of Caenorhabditis elegans.

Copley RR, Aloy P, Russell RB, Telford MJ. Copley RR, et al. Among authors: russell rb. Evol Dev. 2004 May-Jun;6(3):164-9. doi: 10.1111/j.1525-142X.2004.04021.x. Evol Dev. 2004. PMID: 15099303

114

Taking the mystery out of biological networks.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. EMBO Rep. 2004 Apr;5(4):349-50. doi: 10.1038/sj.embor.7400129. EMBO Rep. 2004. PMID: 15060570 Free PMC article. No abstract available.

115

Structure-based assembly of protein complexes in yeast.

Aloy P, Böttcher B, Ceulemans H, Leutwein C, Mellwig C, Fischer S, Gavin AC, Bork P, Superti-Furga G, Serrano L, Russell RB. Aloy P, et al. Among authors: russell rb. Science. 2004 Mar 26;303(5666):2026-9. doi: 10.1126/science.1092645. Science. 2004. PMID: 15044803

116

Identification of Drosophila MicroRNA targets.

Stark A, Brennecke J, Russell RB, Cohen SM. Stark A, et al. Among authors: russell rb. PLoS Biol. 2003 Dec;1(3):E60. doi: 10.1371/journal.pbio.0000060. Epub 2003 Oct 13. PLoS Biol. 2003. PMID: 14691535 Free PMC article.

117

Protein disorder prediction: implications for structural proteomics.

Linding R, Jensen LJ, Diella F, Bork P, Gibson TJ, Russell RB. Linding R, et al. Among authors: russell rb. Structure. 2003 Nov;11(11):1453-9. doi: 10.1016/j.str.2003.10.002. Structure. 2003. PMID: 14604535 Free article.

118

Predictions without templates: new folds, secondary structure, and contacts in CASP5.

Aloy P, Stark A, Hadley C, Russell RB. Aloy P, et al. Among authors: russell rb. Proteins. 2003;53 Suppl 6:436-56. doi: 10.1002/prot.10546. Proteins. 2003. PMID: 14579333

119

The relationship between sequence and interaction divergence in proteins.

Aloy P, Ceulemans H, Stark A, Russell RB. Aloy P, et al. Among authors: russell rb. J Mol Biol. 2003 Oct 3;332(5):989-98. doi: 10.1016/j.jmb.2003.07.006. J Mol Biol. 2003. PMID: 14499603

120

Crystal structure of an archaeal class I aldolase and the evolution of (betaalpha)8 barrel proteins.

Lorentzen E, Pohl E, Zwart P, Stark A, Russell RB, Knura T, Hensel R, Siebers B. Lorentzen E, et al. Among authors: russell rb. J Biol Chem. 2003 Nov 21;278(47):47253-60. doi: 10.1074/jbc.M305922200. Epub 2003 Aug 26. J Biol Chem. 2003. PMID: 12941964 Free article.

121

GlobPlot: Exploring protein sequences for globularity and disorder.

Linding R, Russell RB, Neduva V, Gibson TJ. Linding R, et al. Among authors: russell rb. Nucleic Acids Res. 2003 Jul 1;31(13):3701-8. doi: 10.1093/nar/gkg519. Nucleic Acids Res. 2003. PMID: 12824398 Free PMC article.

122

Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures.

Stark A, Russell RB. Stark A, et al. Among authors: russell rb. Nucleic Acids Res. 2003 Jul 1;31(13):3341-4. doi: 10.1093/nar/gkg506. Nucleic Acids Res. 2003. PMID: 12824322 Free PMC article.

123

bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila.

Brennecke J, Hipfner DR, Stark A, Russell RB, Cohen SM. Brennecke J, et al. Among authors: russell rb. Cell. 2003 Apr 4;113(1):25-36. doi: 10.1016/s0092-8674(03)00231-9. Cell. 2003. PMID: 12679032 Free article.

124

A model for statistical significance of local similarities in structure.

Stark A, Sunyaev S, Russell RB. Stark A, et al. Among authors: russell rb. J Mol Biol. 2003 Mar 7;326(5):1307-16. doi: 10.1016/s0022-2836(03)00045-7. J Mol Biol. 2003. PMID: 12595245 Review.

125

InterPreTS: protein interaction prediction through tertiary structure.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Bioinformatics. 2003 Jan;19(1):161-2. doi: 10.1093/bioinformatics/19.1.161. Bioinformatics. 2003. PMID: 12499311

126

Getting the most from your protein sequence.

Copley RR, Russell RB. Copley RR, et al. Among authors: russell rb. Methods Mol Biol. 2003;211:411-30. doi: 10.1385/1-59259-342-9:411. Methods Mol Biol. 2003. PMID: 12489448 No abstract available.

127

The third dimension for protein interactions and complexes.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Trends Biochem Sci. 2002 Dec;27(12):633-8. doi: 10.1016/s0968-0004(02)02204-1. Trends Biochem Sci. 2002. PMID: 12468233 Review. No abstract available.

128

A dynamic structural model for estrogen receptor-alpha activation by ligands, emphasizing the role of interactions between distant A and E domains.

Métivier R, Stark A, Flouriot G, Hübner MR, Brand H, Penot G, Manu D, Denger S, Reid G, Kos M, Russell RB, Kah O, Pakdel F, Gannon F. Métivier R, et al. Among authors: russell rb. Mol Cell. 2002 Nov;10(5):1019-32. doi: 10.1016/s1097-2765(02)00746-3. Mol Cell. 2002. PMID: 12453411 Free article.

129

Potential artefacts in protein-interaction networks.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. FEBS Lett. 2002 Oct 23;530(1-3):253-4. doi: 10.1016/s0014-5793(02)03427-0. FEBS Lett. 2002. PMID: 12387902 Free article. No abstract available.

130

Genomics, proteomics and bioinformatics: all in the same boat.

Russell RB. Russell RB. Genome Biol. 2002 Sep 24;3(10):REPORTS4034. doi: 10.1186/gb-2002-3-10-reports4034. Epub 2002 Sep 24. Genome Biol. 2002. PMID: 12374575 Free PMC article.

131

A complex prediction: three-dimensional model of the yeast exosome.

Aloy P, Ciccarelli FD, Leutwein C, Gavin AC, Superti-Furga G, Bork P, Bottcher B, Russell RB. Aloy P, et al. Among authors: russell rb. EMBO Rep. 2002 Jul;3(7):628-35. doi: 10.1093/embo-reports/kvf135. EMBO Rep. 2002. PMID: 12101094 Free PMC article.

132

Evolutionary relationship between the bacterial HPr kinase and the ubiquitous PEP-carboxykinase: expanding the P-loop nucleotidyl transferase superfamily.

Russell RB, Márquez JA, Hengstenberg W, Scheffzek K. Russell RB, et al. FEBS Lett. 2002 Apr 24;517(1-3):1-6. doi: 10.1016/s0014-5793(02)02518-8. FEBS Lett. 2002. PMID: 12062398 Free article.

133

Fold recognition without folds.

Koretke KK, Russell RB, Lupas AN. Koretke KK, et al. Among authors: russell rb. Protein Sci. 2002 Jun;11(6):1575-9. doi: 10.1110/ps.3590102. Protein Sci. 2002. PMID: 12021456 Free PMC article.

134

The natural history of protein domains.

Ponting CP, Russell RR. Ponting CP, et al. Annu Rev Biophys Biomol Struct. 2002;31:45-71. doi: 10.1146/annurev.biophys.31.082901.134314. Epub 2001 Oct 25. Annu Rev Biophys Biomol Struct. 2002. PMID: 11988462 Review.

135

Interrogating protein interaction networks through structural biology.

Aloy P, Russell RB. Aloy P, et al. Among authors: russell rb. Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):5896-901. doi: 10.1073/pnas.092147999. Epub 2002 Apr 23. Proc Natl Acad Sci U S A. 2002. PMID: 11972061 Free PMC article.

136

Aloy P, Oliva B, Querol E, Aviles FX, Russell RB. Aloy P, et al. Among authors: russell rb. Protein Sci. 2002 May;11(5):1101-16. doi: 10.1110/ps.3950102. Protein Sci. 2002. PMID: 11967367 Free PMC article.

137

Structure of the full-length HPr kinase/phosphatase from Staphylococcus xylosus at 1.95 A resolution: Mimicking the product/substrate of the phospho transfer reactions.

Márquez JA, Hasenbein S, Koch B, Fieulaine S, Nessler S, Russell RB, Hengstenberg W, Scheffzek K. Márquez JA, et al. Among authors: russell rb. Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3458-63. doi: 10.1073/pnas.052461499. Proc Natl Acad Sci U S A. 2002. PMID: 11904409 Free PMC article.

138

Classification of protein folds.

Russell RB. Russell RB. Mol Biotechnol. 2002 Jan;20(1):17-28. doi: 10.1385/MB:20:1:017. Mol Biotechnol. 2002. PMID: 11876296 Review.

139

CASH--a beta-helix domain widespread among carbohydrate-binding proteins.

Ciccarelli FD, Copley RR, Doerks T, Russell RB, Bork P. Ciccarelli FD, et al. Among authors: russell rb. Trends Biochem Sci. 2002 Feb;27(2):59-62. doi: 10.1016/s0968-0004(01)02046-1. Trends Biochem Sci. 2002. PMID: 11852237

140

Fold recognition from sequence comparisons.

Koretke KK, Russell RB, Lupas AN. Koretke KK, et al. Among authors: russell rb. Proteins. 2001;Suppl 5:68-75. doi: 10.1002/prot.10000. Proteins. 2001. PMID: 11835483

141

Predicting function from structure: examples of the serine protease inhibitor canonical loop conformation found in extracellular proteins.

Jackson RM, Russell RB. Jackson RM, et al. Among authors: russell rb. Comput Chem. 2001 Dec;26(1):31-9. doi: 10.1016/s0097-8485(01)00097-3. Comput Chem. 2001. PMID: 11765849

142

GABA(B2) is essential for g-protein coupling of the GABA(B) receptor heterodimer.

Robbins MJ, Calver AR, Filippov AK, Hirst WD, Russell RB, Wood MD, Nasir S, Couve A, Brown DA, Moss SJ, Pangalos MN. Robbins MJ, et al. Among authors: russell rb. J Neurosci. 2001 Oct 15;21(20):8043-52. doi: 10.1523/JNEUROSCI.21-20-08043.2001. J Neurosci. 2001. PMID: 11588177 Free PMC article.

143

Exon structure conservation despite low sequence similarity: a relic of dramatic events in evolution?

Betts MJ, Guigó R, Agarwal P, Russell RB. Betts MJ, et al. Among authors: russell rb. EMBO J. 2001 Oct 1;20(19):5354-60. doi: 10.1093/emboj/20.19.5354. EMBO J. 2001. PMID: 11574467 Free PMC article.

144

On the evolution of protein folds: are similar motifs in different protein folds the result of convergence, insertion, or relics of an ancient peptide world?

Lupas AN, Ponting CP, Russell RB. Lupas AN, et al. Among authors: russell rb. J Struct Biol. 2001 May-Jun;134(2-3):191-203. doi: 10.1006/jsbi.2001.4393. J Struct Biol. 2001. PMID: 11551179 Review.

145

Sialidase-like Asp-boxes: sequence-similar structures within different protein folds.

Copley RR, Russell RB, Ponting CP. Copley RR, et al. Among authors: russell rb. Protein Sci. 2001 Feb;10(2):285-92. doi: 10.1110/ps.31901. Protein Sci. 2001. PMID: 11266614 Free PMC article.

146

Identification of distant homologues of fibroblast growth factors suggests a common ancestor for all beta-trefoil proteins.

Ponting CP, Russell RB. Ponting CP, et al. Among authors: russell rb. J Mol Biol. 2000 Oct 6;302(5):1041-7. doi: 10.1006/jmbi.2000.4087. J Mol Biol. 2000. PMID: 11183773

147

The C-terminal domains of the GABA(b) receptor subunits mediate intracellular trafficking but are not required for receptor signaling.

Calver AR, Robbins MJ, Cosio C, Rice SQ, Babbs AJ, Hirst WD, Boyfield I, Wood MD, Russell RB, Price GW, Couve A, Moss SJ, Pangalos MN. Calver AR, et al. Among authors: russell rb. J Neurosci. 2001 Feb 15;21(4):1203-10. doi: 10.1523/JNEUROSCI.21-04-01203.2001. J Neurosci. 2001. PMID: 11160390 Free PMC article.

148

New roles for structure in biology and drug discovery.

Russell RB, Eggleston DS. Russell RB, et al. Nat Struct Biol. 2000 Nov;7 Suppl:928-30. doi: 10.1038/80691. Nat Struct Biol. 2000. PMID: 11103989 No abstract available.

149

Classification of protein folds.

Russell RB. Russell RB. Methods Mol Biol. 2000;143:305-24. doi: 10.1385/1-59259-368-2:305. Methods Mol Biol. 2000. PMID: 11084911 No abstract available.

150

Changes in mitochondrial genetic codes as phylogenetic characters: two examples from the flatworms.

Telford MJ, Herniou EA, Russell RB, Littlewood DT. Telford MJ, et al. Among authors: russell rb. Proc Natl Acad Sci U S A. 2000 Oct 10;97(21):11359-64. doi: 10.1073/pnas.97.21.11359. Proc Natl Acad Sci U S A. 2000. PMID: 11027335 Free PMC article.

151

Analysis and prediction of functional sub-types from protein sequence alignments.

Hannenhalli SS, Russell RB. Hannenhalli SS, et al. Among authors: russell rb. J Mol Biol. 2000 Oct 13;303(1):61-76. doi: 10.1006/jmbi.2000.4036. J Mol Biol. 2000. PMID: 11021970

152

The serine protease inhibitor canonical loop conformation: examples found in extracellular hydrolases, toxins, cytokines and viral proteins.

Jackson RM, Russell RB. Jackson RM, et al. Among authors: russell rb. J Mol Biol. 2000 Feb 18;296(2):325-34. doi: 10.1006/jmbi.1999.3389. J Mol Biol. 2000. PMID: 10669590

153

A lipid-binding domain in Wnt: a case of mistaken identity?

Barnes MR, Russell RB, Copley RR, Ponting CP, Bork P, Cumberledge S, Reichsman F, Moore HM. Barnes MR, et al. Among authors: russell rb. Curr Biol. 1999 Oct 7;9(19):R717-9. doi: 10.1016/s0960-9822(99)80465-5. Curr Biol. 1999. PMID: 10531014 Free article. No abstract available.

154

Fold recognition using sequence and secondary structure information.

Koretke KK, Russell RB, Copley RR, Lupas AN. Koretke KK, et al. Among authors: russell rb. Proteins. 1999;Suppl 3:141-8. doi: 10.1002/(sici)1097-0134(1999)37:3+<141::aid-prot19>3.3.co;2-6. Proteins. 1999. PMID: 10526363

155

Functional analysis of H-Ryk, an atypical member of the receptor tyrosine kinase family.

Katso RM, Russell RB, Ganesan TS. Katso RM, et al. Among authors: russell rb. Mol Cell Biol. 1999 Sep;19(9):6427-40. doi: 10.1128/MCB.19.9.6427. Mol Cell Biol. 1999. PMID: 10454588 Free PMC article.

156

Misleading local sequence alignments: implications for comparative protein modelling.

Saqi MA, Russell RB, Sternberg MJ. Saqi MA, et al. Among authors: russell rb. Protein Eng. 1998 Aug;11(8):627-30. doi: 10.1093/protein/11.8.627. Protein Eng. 1998. PMID: 9749915

157

Supersites within superfolds. Binding site similarity in the absence of homology.

Russell RB, Sasieni PD, Sternberg MJ. Russell RB, et al. J Mol Biol. 1998 Oct 2;282(4):903-18. doi: 10.1006/jmbi.1998.2043. J Mol Biol. 1998. PMID: 9743635

158

Protein fold irregularities that hinder sequence analysis.

Russell RB, Ponting CP. Russell RB, et al. Curr Opin Struct Biol. 1998 Jun;8(3):364-71. doi: 10.1016/s0959-440x(98)80071-7. Curr Opin Struct Biol. 1998. PMID: 9666333 Review.

159

Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution.

Russell RB. Russell RB. J Mol Biol. 1998 Jun 26;279(5):1211-27. doi: 10.1006/jmbi.1998.1844. J Mol Biol. 1998. PMID: 9642096

160

Recognition of analogous and homologous protein folds--assessment of prediction success and associated alignment accuracy using empirical substitution matrices.

Russell RB, Saqi MA, Bates PA, Sayle RA, Sternberg MJ. Russell RB, et al. Protein Eng. 1998 Jan;11(1):1-9. doi: 10.1093/protein/11.1.1. Protein Eng. 1998. PMID: 9579654

161

Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation.

Russell RB, Saqi MA, Sayle RA, Bates PA, Sternberg MJ. Russell RB, et al. J Mol Biol. 1997 Jun 13;269(3):423-39. doi: 10.1006/jmbi.1997.1019. J Mol Biol. 1997. PMID: 9199410

162

Two new examples of protein structural similarities within the structure-function twilight zone.

Russell RB, Sternberg MJ. Russell RB, et al. Protein Eng. 1997 Apr;10(4):333-8. doi: 10.1093/protein/10.4.333. Protein Eng. 1997. PMID: 9194157

163

Protein fold recognition by mapping predicted secondary structures.

Russell RB, Copley RR, Barton GJ. Russell RB, et al. J Mol Biol. 1996 Jun 14;259(3):349-65. doi: 10.1006/jmbi.1996.0325. J Mol Biol. 1996. PMID: 8676374

164

A novel binding site in catalase is suggested by structural similarity to the calycin superfamily.

Russell RB, Sternberg MJ. Russell RB, et al. Protein Eng. 1996 Feb;9(2):107-11. doi: 10.1093/protein/9.2.107. Protein Eng. 1996. PMID: 9005431 No abstract available.

165

Swaposins: circular permutations within genes encoding saposin homologues.

Ponting CP, Russell RB. Ponting CP, et al. Among authors: russell rb. Trends Biochem Sci. 1995 May;20(5):179-80. doi: 10.1016/s0968-0004(00)89003-9. Trends Biochem Sci. 1995. PMID: 7610480 Review. No abstract available.

166

Structure prediction. How good are we?

Russell RB, Sternberg MJ. Russell RB, et al. Curr Biol. 1995 May 1;5(5):488-90. doi: 10.1016/s0960-9822(95)00099-6. Curr Biol. 1995. PMID: 7583096 Free article. Review.

167

Towards an intelligent system for the automatic assignment of domains in globular proteins.

Sternberg MJ, Hegyi H, Islam SA, Luo J, Russell RB. Sternberg MJ, et al. Among authors: russell rb. Proc Int Conf Intell Syst Mol Biol. 1995;3:376-83. Proc Int Conf Intell Syst Mol Biol. 1995. PMID: 7584461

168

Structural features can be unconserved in proteins with similar folds. An analysis of side-chain to side-chain contacts secondary structure and accessibility.

Russell RB, Barton GJ. Russell RB, et al. J Mol Biol. 1994 Dec 2;244(3):332-50. doi: 10.1006/jmbi.1994.1733. J Mol Biol. 1994. PMID: 7966343

169

Domain insertion.

Russell RB. Russell RB. Protein Eng. 1994 Dec;7(12):1407-10. doi: 10.1093/protein/7.12.1407. Protein Eng. 1994. PMID: 7716150 Review. No abstract available.

170

Structural similarity between the p17 matrix protein of HIV-1 and interferon-gamma.

Matthews S, Barlow P, Boyd J, Barton G, Russell R, Mills H, Cunningham M, Meyers N, Burns N, Clark N, et al. Matthews S, et al. Nature. 1994 Aug 25;370(6491):666-8. doi: 10.1038/370666a0. Nature. 1994. PMID: 8065455

171

The limits of protein secondary structure prediction accuracy from multiple sequence alignment.

Russell RB, Barton GJ. Russell RB, et al. J Mol Biol. 1993 Dec 20;234(4):951-7. doi: 10.1006/jmbi.1993.1649. J Mol Biol. 1993. PMID: 8263941

172

An SH2-SH3 domain hybrid.

Russell RB, Barton GJ. Russell RB, et al. Nature. 1993 Aug 26;364(6440):765. doi: 10.1038/364765a0. Nature. 1993. PMID: 7689175 No abstract available.

173

Protein structure prediction.

Barton GJ, Russell RB. Barton GJ, et al. Among authors: russell rb. Nature. 1993 Feb 11;361(6412):505-6. doi: 10.1038/361505b0. Nature. 1993. PMID: 8498990 No abstract available.

174

Multiple protein sequence alignment from tertiary structure comparison: assignment of global and residue confidence levels.

Russell RB, Barton GJ. Russell RB, et al. Proteins. 1992 Oct;14(2):309-23. doi: 10.1002/prot.340140216. Proteins. 1992. PMID: 1409577

175

Conservation analysis and structure prediction of the SH2 family of phosphotyrosine binding domains.

Russell RB, Breed J, Barton GJ. Russell RB, et al. FEBS Lett. 1992 Jun 8;304(1):15-20. doi: 10.1016/0014-5793(92)80579-6. FEBS Lett. 1992. PMID: 1377638 Free article.

176

Consequences of intramolecular ionic interactions for the activation rate of human pepsinogens A and C as revealed by molecular modelling.

Bank RA, Russell RB, Pals G, James MN. Bank RA, et al. Among authors: russell rb. Adv Exp Med Biol. 1991;306:101-5. doi: 10.1007/978-1-4684-6012-4_11. Adv Exp Med Biol. 1991. PMID: 1812695 No abstract available.

177

Molecular biology of human renin and its gene.

Baxter JD, Duncan K, Chu W, James MN, Russell RB, Haidar MA, DeNoto FM, Hsueh W, Reudelhuber TL. Baxter JD, et al. Among authors: russell rb. Recent Prog Horm Res. 1991;47:211-57; discussion 257-8. doi: 10.1016/b978-0-12-571147-0.50011-1. Recent Prog Horm Res. 1991. PMID: 1745821 Review.

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